Gene : Glyma.04G158100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33209:SF1 - SERINE PROTEASE SPPA, CHLOROPLASTIC Genomic Order:  1581
Name:  ? Glyma.04G158100 Secondary Identifier:  ? PAC:30489104
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G158100 0.5kb upstream 0.5kb upstream 22453 true Chr04: 38518034-38540486 Glycine max
Glyma.04G158100 0.5kb upstream 0.5kb upstream 500 false Chr04: 38518034-38518533 Glycine max
Glyma.04G158100 0.5kb downstream 0.5kb downstream 22453 true Chr04: 38518534-38540986 Glycine max
Glyma.04G158100 0.5kb downstream 0.5kb downstream 500 false Chr04: 38540487-38540986 Glycine max
Glyma.04G158100 1.0kb upstream 1.0kb upstream 22953 true Chr04: 38517534-38540486 Glycine max
Glyma.04G158100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 38517534-38518533 Glycine max
Glyma.04G158100 1.0kb downstream 1.0kb downstream 22953 true Chr04: 38518534-38541486 Glycine max
Glyma.04G158100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 38540487-38541486 Glycine max
Glyma.04G158100 2.0kb upstream 2.0kb upstream 23953 true Chr04: 38516534-38540486 Glycine max
Glyma.04G158100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 38516534-38518533 Glycine max
Glyma.04G158100 2.0kb downstream 2.0kb downstream 23953 true Chr04: 38518534-38542486 Glycine max
Glyma.04G158100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 38540487-38542486 Glycine max
Glyma.04G158100 5.0kb upstream 5.0kb upstream 26953 true Chr04: 38513534-38540486 Glycine max
Glyma.04G158100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 38513534-38518533 Glycine max
Glyma.04G158100 5.0kb downstream 5.0kb downstream 26953 true Chr04: 38518534-38545486 Glycine max
Glyma.04G158100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 38540487-38545486 Glycine max
Glyma.04G158100 10.0kb upstream 10.0kb upstream 31953 true Chr04: 38508534-38540486 Glycine max
Glyma.04G158100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 38508534-38518533 Glycine max
Glyma.04G158100 10.0kb downstream 10.0kb downstream 31953 true Chr04: 38518534-38550486 Glycine max
Glyma.04G158100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 38540487-38550486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307269 5265 Fabidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4059 0.0 71.9348   High
cufflinks 10.3627 0.0 35.1532    
cufflinks 7.87027 0.0 27.0764    
cufflinks 6.82196 0.0 23.9317    
cufflinks 3.20754 0.0 11.3193   Low
cufflinks 2.88091 0.0 12.302   Low
cufflinks 7.17795 0.0 25.0877    
cufflinks 6.50006 0.0 22.8586    
cufflinks 3.26609 0.0 15.0879   Low
cufflinks 0.401        
cufflinks 0.092       Low
cufflinks 0.451        
cufflinks 0.161        
cufflinks 0.123        
cufflinks 0.165        
cufflinks 1.826       High
cufflinks 0.093       Low
cufflinks 0.444        
cufflinks 0.655        
cufflinks 1.971       High
cufflinks 0.142        
cufflinks 1.863       High
cufflinks 1.291       High
cufflinks 0.094       Low
cufflinks 1.926       High
cufflinks 0.113        

0 Strain