Gene : Glyma.04G155300 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4495 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B Genomic Order:  1553
Name:  ? Glyma.04G155300 Secondary Identifier:  ? PAC:30488683
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G155300 0.5kb upstream 0.5kb upstream 9032 true Chr04: 36122741-36131772 Glycine max
Glyma.04G155300 0.5kb upstream 0.5kb upstream 500 false Chr04: 36131273-36131772 Glycine max
Glyma.04G155300 0.5kb downstream 0.5kb downstream 9032 true Chr04: 36122241-36131272 Glycine max
Glyma.04G155300 0.5kb downstream 0.5kb downstream 500 false Chr04: 36122241-36122740 Glycine max
Glyma.04G155300 1.0kb upstream 1.0kb upstream 9532 true Chr04: 36122741-36132272 Glycine max
Glyma.04G155300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36131273-36132272 Glycine max
Glyma.04G155300 1.0kb downstream 1.0kb downstream 9532 true Chr04: 36121741-36131272 Glycine max
Glyma.04G155300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36121741-36122740 Glycine max
Glyma.04G155300 2.0kb upstream 2.0kb upstream 10532 true Chr04: 36122741-36133272 Glycine max
Glyma.04G155300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36131273-36133272 Glycine max
Glyma.04G155300 2.0kb downstream 2.0kb downstream 10532 true Chr04: 36120741-36131272 Glycine max
Glyma.04G155300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36120741-36122740 Glycine max
Glyma.04G155300 5.0kb upstream 5.0kb upstream 13532 true Chr04: 36122741-36136272 Glycine max
Glyma.04G155300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36131273-36136272 Glycine max
Glyma.04G155300 5.0kb downstream 5.0kb downstream 13532 true Chr04: 36117741-36131272 Glycine max
Glyma.04G155300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36117741-36122740 Glycine max
Glyma.04G155300 10.0kb upstream 10.0kb upstream 18532 true Chr04: 36122741-36141272 Glycine max
Glyma.04G155300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36131273-36141272 Glycine max
Glyma.04G155300 10.0kb downstream 10.0kb downstream 18532 true Chr04: 36112741-36131272 Glycine max
Glyma.04G155300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36112741-36122740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041259 5273 Angiosperm View MSA
122299731 5265 Fabidae View MSA
124069900 5270 Rosid View MSA
123745453 5271 Pentapetalae View MSA
122793861 5272 Eudicot View MSA
121350685 5274 Embryophyte View MSA
123425021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6625 0.0 37.4417   Low
cufflinks 17.1187 0.0 48.6905    
cufflinks 17.0699 0.0 48.5013    
cufflinks 25.3571 0.0 69.4813 High  
cufflinks 16.1704 0.0 46.2532    
cufflinks 21.6451 0.0 60.1209    
cufflinks 14.9566 0.0 43.2732    
cufflinks 38.4828 0.0 103.175 High High
cufflinks 17.5041 0.0 49.6405    
cufflinks 2.352       High
cufflinks 1.607        
cufflinks 1.309        
cufflinks 2.033        
cufflinks 2.294       High
cufflinks 0.614       Low
cufflinks 1.695        
cufflinks 2.32       High
cufflinks 1.514        
cufflinks 1.456        
cufflinks 1.016       Low
cufflinks 1.552        
cufflinks 1.357        
cufflinks 1.433        
cufflinks 1.592        
cufflinks 1.166        
cufflinks 1.861        

0 Strain