Gene : Glyma.04G161600 G. max Wm82.a2.v1
Defline:  (1 of 4) PF06549 - Protein of unknown function (DUF1118) (DUF1118) Genomic Order:  1616
Name:  ? Glyma.04G161600 Secondary Identifier:  ? PAC:30489826
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G161600 0.5kb upstream 0.5kb upstream 2679 true Chr04: 40088117-40090795 Glycine max
Glyma.04G161600 0.5kb upstream 0.5kb upstream 500 false Chr04: 40090296-40090795 Glycine max
Glyma.04G161600 0.5kb downstream 0.5kb downstream 2679 true Chr04: 40087617-40090295 Glycine max
Glyma.04G161600 0.5kb downstream 0.5kb downstream 500 false Chr04: 40087617-40088116 Glycine max
Glyma.04G161600 1.0kb upstream 1.0kb upstream 3179 true Chr04: 40088117-40091295 Glycine max
Glyma.04G161600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40090296-40091295 Glycine max
Glyma.04G161600 1.0kb downstream 1.0kb downstream 3179 true Chr04: 40087117-40090295 Glycine max
Glyma.04G161600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40087117-40088116 Glycine max
Glyma.04G161600 2.0kb upstream 2.0kb upstream 4179 true Chr04: 40088117-40092295 Glycine max
Glyma.04G161600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40090296-40092295 Glycine max
Glyma.04G161600 2.0kb downstream 2.0kb downstream 4179 true Chr04: 40086117-40090295 Glycine max
Glyma.04G161600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40086117-40088116 Glycine max
Glyma.04G161600 5.0kb upstream 5.0kb upstream 7179 true Chr04: 40088117-40095295 Glycine max
Glyma.04G161600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40090296-40095295 Glycine max
Glyma.04G161600 5.0kb downstream 5.0kb downstream 7179 true Chr04: 40083117-40090295 Glycine max
Glyma.04G161600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40083117-40088116 Glycine max
Glyma.04G161600 10.0kb upstream 10.0kb upstream 12179 true Chr04: 40088117-40100295 Glycine max
Glyma.04G161600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40090296-40100295 Glycine max
Glyma.04G161600 10.0kb downstream 10.0kb downstream 12179 true Chr04: 40078117-40090295 Glycine max
Glyma.04G161600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40078117-40088116 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309361 5265 Fabidae View MSA
124069799 5270 Rosid View MSA
123739706 5271 Pentapetalae View MSA
122790569 5272 Eudicot View MSA
122046942 5273 Angiosperm View MSA
121348217 5274 Embryophyte View MSA
123424979 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6961 0.0 71.3624 High High
cufflinks 12.333 0.0 34.4703   High
cufflinks 1.77023 0.0 6.25797    
cufflinks 4.38651 0.0 13.9959    
cufflinks 0.702451 0.0 2.62603    
cufflinks 0.693289 0.0 2.59396    
cufflinks 3.16245 0.0 10.5533    
cufflinks 3.10466 0.0 10.3469    
cufflinks 0.107117 0.0 0.431989 Low Low
cufflinks 3.59        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.758        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 17.411     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.065        
cufflinks 4.756        
cufflinks 19.629     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 19.78     High  
cufflinks 16.87     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 20.378     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain