Gene : Glyma.04G162400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12542//PTHR12542:SF20 - EXOCYST COMPLEX PROTEIN EXO70 Genomic Order:  1624
Name:  ? Glyma.04G162400 Secondary Identifier:  ? PAC:30489295
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G162400 0.5kb upstream 0.5kb upstream 2896 true Chr04: 40236481-40239376 Glycine max
Glyma.04G162400 0.5kb upstream 0.5kb upstream 500 false Chr04: 40236481-40236980 Glycine max
Glyma.04G162400 0.5kb downstream 0.5kb downstream 2896 true Chr04: 40236981-40239876 Glycine max
Glyma.04G162400 0.5kb downstream 0.5kb downstream 500 false Chr04: 40239377-40239876 Glycine max
Glyma.04G162400 1.0kb upstream 1.0kb upstream 3396 true Chr04: 40235981-40239376 Glycine max
Glyma.04G162400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40235981-40236980 Glycine max
Glyma.04G162400 1.0kb downstream 1.0kb downstream 3396 true Chr04: 40236981-40240376 Glycine max
Glyma.04G162400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40239377-40240376 Glycine max
Glyma.04G162400 2.0kb upstream 2.0kb upstream 4396 true Chr04: 40234981-40239376 Glycine max
Glyma.04G162400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40234981-40236980 Glycine max
Glyma.04G162400 2.0kb downstream 2.0kb downstream 4396 true Chr04: 40236981-40241376 Glycine max
Glyma.04G162400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40239377-40241376 Glycine max
Glyma.04G162400 5.0kb upstream 5.0kb upstream 7396 true Chr04: 40231981-40239376 Glycine max
Glyma.04G162400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40231981-40236980 Glycine max
Glyma.04G162400 5.0kb downstream 5.0kb downstream 7396 true Chr04: 40236981-40244376 Glycine max
Glyma.04G162400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40239377-40244376 Glycine max
Glyma.04G162400 10.0kb upstream 10.0kb upstream 12396 true Chr04: 40226981-40239376 Glycine max
Glyma.04G162400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40226981-40236980 Glycine max
Glyma.04G162400 10.0kb downstream 10.0kb downstream 12396 true Chr04: 40236981-40249376 Glycine max
Glyma.04G162400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40239377-40249376 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779304 5273 Angiosperm View MSA
122305994 5265 Fabidae View MSA
124060762 5270 Rosid View MSA
123742010 5271 Pentapetalae View MSA
122770172 5272 Eudicot View MSA
121050976 5274 Embryophyte View MSA
123091083 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.21414 0.0 14.5068    
cufflinks 1.14008 0.0 3.85942    
cufflinks 2.91201 0.0 8.64453    
cufflinks 0.841751 0.0 2.93711    
cufflinks 0.9867 0.0 3.39823    
cufflinks 5.51665 0.0 15.2579   High
cufflinks 0.0943234 0.0 0.370027 Low Low
cufflinks 4.4709 0.0 12.6069    
cufflinks 1.26551 0.0 4.22843    
cufflinks 2.591        
cufflinks 3.055        
cufflinks 3.718       High
cufflinks 2.384        
cufflinks 0.54       Low
cufflinks 0.982        
cufflinks 1.082        
cufflinks 5.179       High
cufflinks 3.485       High
cufflinks 1.065        
cufflinks 0.606       Low
cufflinks 1.065        
cufflinks 1.019        
cufflinks 1.544        
cufflinks 3.811       High
cufflinks 0.627       Low
cufflinks 1.712        

0 Strain