Gene : Glyma.04G161000 G. max Wm82.a2.v1
Defline:  (1 of 25) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  1610
Name:  ? Glyma.04G161000 Secondary Identifier:  ? PAC:30489332
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G161000 0.5kb upstream 0.5kb upstream 6780 true Chr04: 39921785-39928564 Glycine max
Glyma.04G161000 0.5kb upstream 0.5kb upstream 500 false Chr04: 39921785-39922284 Glycine max
Glyma.04G161000 0.5kb downstream 0.5kb downstream 6780 true Chr04: 39922285-39929064 Glycine max
Glyma.04G161000 0.5kb downstream 0.5kb downstream 500 false Chr04: 39928565-39929064 Glycine max
Glyma.04G161000 1.0kb upstream 1.0kb upstream 7280 true Chr04: 39921285-39928564 Glycine max
Glyma.04G161000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39921285-39922284 Glycine max
Glyma.04G161000 1.0kb downstream 1.0kb downstream 7280 true Chr04: 39922285-39929564 Glycine max
Glyma.04G161000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39928565-39929564 Glycine max
Glyma.04G161000 2.0kb upstream 2.0kb upstream 8280 true Chr04: 39920285-39928564 Glycine max
Glyma.04G161000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39920285-39922284 Glycine max
Glyma.04G161000 2.0kb downstream 2.0kb downstream 8280 true Chr04: 39922285-39930564 Glycine max
Glyma.04G161000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39928565-39930564 Glycine max
Glyma.04G161000 5.0kb upstream 5.0kb upstream 11280 true Chr04: 39917285-39928564 Glycine max
Glyma.04G161000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39917285-39922284 Glycine max
Glyma.04G161000 5.0kb downstream 5.0kb downstream 11280 true Chr04: 39922285-39933564 Glycine max
Glyma.04G161000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39928565-39933564 Glycine max
Glyma.04G161000 10.0kb upstream 10.0kb upstream 16280 true Chr04: 39912285-39928564 Glycine max
Glyma.04G161000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39912285-39922284 Glycine max
Glyma.04G161000 10.0kb downstream 10.0kb downstream 16280 true Chr04: 39922285-39938564 Glycine max
Glyma.04G161000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39928565-39938564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306950 5265 Fabidae View MSA
124062357 5270 Rosid View MSA
123739411 5271 Pentapetalae View MSA
122786365 5272 Eudicot View MSA
122043691 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37974 0.0 14.925    
cufflinks 5.02703 0.0 19.55    
cufflinks 1.75248 0.0 6.3027   Low
cufflinks 3.367 0.0 13.6916    
cufflinks 7.07088 0.0 27.2663   High
cufflinks 8.75253 0.0 34.2388   High
cufflinks 3.45629 0.0 13.9512    
cufflinks 2.74507 0.0 8.75432    
cufflinks 2.49253 0.0 9.56819    
cufflinks 2.786        
cufflinks 0.144       Low
cufflinks 1.619        
cufflinks 2.197        
cufflinks 2.432        
cufflinks 0.341        
cufflinks 2.494        
cufflinks 0.209       Low
cufflinks 3.239        
cufflinks 1.431        
cufflinks 2.71        
cufflinks 0.161       Low
cufflinks 2.608        
cufflinks 1.828        
cufflinks 0.062       Low
cufflinks 2.464        
cufflinks 0.436        

0 Strain