Gene : Glyma.04G159600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Genomic Order:  1596
Name:  ? Glyma.04G159600 Secondary Identifier:  ? PAC:30487785
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G159600 0.5kb upstream 0.5kb upstream 5251 true Chr04: 39578353-39583603 Glycine max
Glyma.04G159600 0.5kb upstream 0.5kb upstream 500 false Chr04: 39578353-39578852 Glycine max
Glyma.04G159600 0.5kb downstream 0.5kb downstream 5251 true Chr04: 39578853-39584103 Glycine max
Glyma.04G159600 0.5kb downstream 0.5kb downstream 500 false Chr04: 39583604-39584103 Glycine max
Glyma.04G159600 1.0kb upstream 1.0kb upstream 5751 true Chr04: 39577853-39583603 Glycine max
Glyma.04G159600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39577853-39578852 Glycine max
Glyma.04G159600 1.0kb downstream 1.0kb downstream 5751 true Chr04: 39578853-39584603 Glycine max
Glyma.04G159600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39583604-39584603 Glycine max
Glyma.04G159600 2.0kb upstream 2.0kb upstream 6751 true Chr04: 39576853-39583603 Glycine max
Glyma.04G159600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39576853-39578852 Glycine max
Glyma.04G159600 2.0kb downstream 2.0kb downstream 6751 true Chr04: 39578853-39585603 Glycine max
Glyma.04G159600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39583604-39585603 Glycine max
Glyma.04G159600 5.0kb upstream 5.0kb upstream 9751 true Chr04: 39573853-39583603 Glycine max
Glyma.04G159600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39573853-39578852 Glycine max
Glyma.04G159600 5.0kb downstream 5.0kb downstream 9751 true Chr04: 39578853-39588603 Glycine max
Glyma.04G159600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39583604-39588603 Glycine max
Glyma.04G159600 10.0kb upstream 10.0kb upstream 14751 true Chr04: 39568853-39583603 Glycine max
Glyma.04G159600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39568853-39578852 Glycine max
Glyma.04G159600 10.0kb downstream 10.0kb downstream 14751 true Chr04: 39578853-39593603 Glycine max
Glyma.04G159600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39583604-39593603 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303700 5265 Fabidae View MSA
124069639 5270 Rosid View MSA
123751370 5271 Pentapetalae View MSA
122794305 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0526 0.0 3.99564    
cufflinks 13.9778 0.0 50.1623   High
cufflinks 2.2562 0.0 9.46506    
cufflinks 5.93876 0.0 18.6074    
cufflinks 1.72999 0.0 9.58846    
cufflinks 0.996209 0.0 5.0917    
cufflinks 1.43066 0.0 7.04749    
cufflinks 4.83875 0.0 18.7749    
cufflinks 1.39645 0.0 5.05038    
cufflinks 1.981        
cufflinks 0.007     Low Low
cufflinks 1.989        
cufflinks 0.745        
cufflinks 0.518        
cufflinks 0.006     Low Low
cufflinks 2.695        
cufflinks 0.105        
cufflinks 2.985        
cufflinks 4.649        
cufflinks 2.7        
cufflinks 0.017     Low Low
cufflinks 3.323        
cufflinks 3.908        
cufflinks 0.033     Low Low
cufflinks 2.98        
cufflinks 0.049     Low  

0 Strain