Gene : Glyma.04G165500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11673 - TRANSLATION INITIATION FACTOR 5A-RELATED Genomic Order:  1655
Name:  ? Glyma.04G165500 Secondary Identifier:  ? PAC:30488487
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G165500 0.5kb upstream 0.5kb upstream 2996 true Chr04: 41393120-41396115 Glycine max
Glyma.04G165500 0.5kb upstream 0.5kb upstream 500 false Chr04: 41393120-41393619 Glycine max
Glyma.04G165500 0.5kb downstream 0.5kb downstream 2996 true Chr04: 41393620-41396615 Glycine max
Glyma.04G165500 0.5kb downstream 0.5kb downstream 500 false Chr04: 41396116-41396615 Glycine max
Glyma.04G165500 1.0kb upstream 1.0kb upstream 3496 true Chr04: 41392620-41396115 Glycine max
Glyma.04G165500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 41392620-41393619 Glycine max
Glyma.04G165500 1.0kb downstream 1.0kb downstream 3496 true Chr04: 41393620-41397115 Glycine max
Glyma.04G165500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 41396116-41397115 Glycine max
Glyma.04G165500 2.0kb upstream 2.0kb upstream 4496 true Chr04: 41391620-41396115 Glycine max
Glyma.04G165500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 41391620-41393619 Glycine max
Glyma.04G165500 2.0kb downstream 2.0kb downstream 4496 true Chr04: 41393620-41398115 Glycine max
Glyma.04G165500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 41396116-41398115 Glycine max
Glyma.04G165500 5.0kb upstream 5.0kb upstream 7496 true Chr04: 41388620-41396115 Glycine max
Glyma.04G165500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 41388620-41393619 Glycine max
Glyma.04G165500 5.0kb downstream 5.0kb downstream 7496 true Chr04: 41393620-41401115 Glycine max
Glyma.04G165500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 41396116-41401115 Glycine max
Glyma.04G165500 10.0kb upstream 10.0kb upstream 12496 true Chr04: 41383620-41396115 Glycine max
Glyma.04G165500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 41383620-41393619 Glycine max
Glyma.04G165500 10.0kb downstream 10.0kb downstream 12496 true Chr04: 41393620-41406115 Glycine max
Glyma.04G165500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 41396116-41406115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312678 5265 Fabidae View MSA
124072640 5270 Rosid View MSA
123750235 5271 Pentapetalae View MSA
122796875 5272 Eudicot View MSA
122047476 5273 Angiosperm View MSA
121345847 5274 Embryophyte View MSA
123426583 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 151.383 0.0 701.077 High  
cufflinks 160.318 0.0 762.701 High  
cufflinks 119.898 0.0 512.729 High Low
cufflinks 191.641 0.0 851.176 High  
cufflinks 244.122 0.0 1197.39 High  
cufflinks 173.321 0.0 764.574 High  
cufflinks 275.6 0.0 1420.83 High High
cufflinks 313.547 0.0 1747.15 High High
cufflinks 170.661 0.0 728.689 High  
cufflinks 29.907     High High
cufflinks 9.208     High Low
cufflinks 17.615     High  
cufflinks 32.068     High High
cufflinks 39.415     High High
cufflinks 5.597     High Low
cufflinks 18.549     High  
cufflinks 19.262     High  
cufflinks 21.633     High  
cufflinks 22.923     High  
cufflinks 20.18     High  
cufflinks 13.375     High  
cufflinks 20.185     High  
cufflinks 18.765     High  
cufflinks 11.505     High  
cufflinks 18.256     High  
cufflinks 20.835     High  

0 Strain