Gene : Glyma.19G159500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10015//PTHR10015:SF160 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  1595
Name:  ? Glyma.19G159500 Secondary Identifier:  ? PAC:30511287
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G159500 0.5kb upstream 0.5kb upstream 3564 true Chr19: 42029089-42032652 Glycine max
Glyma.19G159500 0.5kb upstream 0.5kb upstream 500 false Chr19: 42029089-42029588 Glycine max
Glyma.19G159500 0.5kb downstream 0.5kb downstream 3564 true Chr19: 42029589-42033152 Glycine max
Glyma.19G159500 0.5kb downstream 0.5kb downstream 500 false Chr19: 42032653-42033152 Glycine max
Glyma.19G159500 1.0kb upstream 1.0kb upstream 4064 true Chr19: 42028589-42032652 Glycine max
Glyma.19G159500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42028589-42029588 Glycine max
Glyma.19G159500 1.0kb downstream 1.0kb downstream 4064 true Chr19: 42029589-42033652 Glycine max
Glyma.19G159500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42032653-42033652 Glycine max
Glyma.19G159500 2.0kb upstream 2.0kb upstream 5064 true Chr19: 42027589-42032652 Glycine max
Glyma.19G159500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42027589-42029588 Glycine max
Glyma.19G159500 2.0kb downstream 2.0kb downstream 5064 true Chr19: 42029589-42034652 Glycine max
Glyma.19G159500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42032653-42034652 Glycine max
Glyma.19G159500 5.0kb upstream 5.0kb upstream 8064 true Chr19: 42024589-42032652 Glycine max
Glyma.19G159500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42024589-42029588 Glycine max
Glyma.19G159500 5.0kb downstream 5.0kb downstream 8064 true Chr19: 42029589-42037652 Glycine max
Glyma.19G159500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42032653-42037652 Glycine max
Glyma.19G159500 10.0kb upstream 10.0kb upstream 13064 true Chr19: 42019589-42032652 Glycine max
Glyma.19G159500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42019589-42029588 Glycine max
Glyma.19G159500 10.0kb downstream 10.0kb downstream 13064 true Chr19: 42029589-42042652 Glycine max
Glyma.19G159500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42032653-42042652 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304909 5265 Fabidae View MSA
124062717 5270 Rosid View MSA
123744763 5271 Pentapetalae View MSA
122793858 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33015 0.0 9.92088    
cufflinks 0.430813 0.0 1.99505    
cufflinks 0.722225 0.0 4.29707    
cufflinks 0.503213 0.0 2.29528    
cufflinks 0.992658 0.0 5.4295    
cufflinks 0.227163 0.0 1.10197 Low  
cufflinks 0.016006 0.0 0.070243 Low Low
cufflinks 0.422168 0.0 2.63123    
cufflinks 3.79742 0.0 13.3842   High
cufflinks 0.015     Low Low
cufflinks 0.09        
cufflinks 0.629       High
cufflinks 0.173        
cufflinks 0.098        
cufflinks 0.224        
cufflinks 0.217        
cufflinks 0.349        
cufflinks 0.407        
cufflinks 0.125        
cufflinks 0.087     Low  
cufflinks 0.056     Low  
cufflinks 0.233        
cufflinks 0.967       High
cufflinks 0.038     Low Low
cufflinks 0.137        
cufflinks 0.088        

0 Strain