Gene : Glyma.19G159600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10593:SF20 - INDETERMINATE-DOMAIN 12 PROTEIN Genomic Order:  1596
Name:  ? Glyma.19G159600 Secondary Identifier:  ? PAC:30511334
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G159600 0.5kb upstream 0.5kb upstream 5080 true Chr19: 42044056-42049135 Glycine max
Glyma.19G159600 0.5kb upstream 0.5kb upstream 500 false Chr19: 42044056-42044555 Glycine max
Glyma.19G159600 0.5kb downstream 0.5kb downstream 5080 true Chr19: 42044556-42049635 Glycine max
Glyma.19G159600 0.5kb downstream 0.5kb downstream 500 false Chr19: 42049136-42049635 Glycine max
Glyma.19G159600 1.0kb upstream 1.0kb upstream 5580 true Chr19: 42043556-42049135 Glycine max
Glyma.19G159600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42043556-42044555 Glycine max
Glyma.19G159600 1.0kb downstream 1.0kb downstream 5580 true Chr19: 42044556-42050135 Glycine max
Glyma.19G159600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42049136-42050135 Glycine max
Glyma.19G159600 2.0kb upstream 2.0kb upstream 6580 true Chr19: 42042556-42049135 Glycine max
Glyma.19G159600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42042556-42044555 Glycine max
Glyma.19G159600 2.0kb downstream 2.0kb downstream 6580 true Chr19: 42044556-42051135 Glycine max
Glyma.19G159600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42049136-42051135 Glycine max
Glyma.19G159600 5.0kb upstream 5.0kb upstream 9580 true Chr19: 42039556-42049135 Glycine max
Glyma.19G159600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42039556-42044555 Glycine max
Glyma.19G159600 5.0kb downstream 5.0kb downstream 9580 true Chr19: 42044556-42054135 Glycine max
Glyma.19G159600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42049136-42054135 Glycine max
Glyma.19G159600 10.0kb upstream 10.0kb upstream 14580 true Chr19: 42034556-42049135 Glycine max
Glyma.19G159600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42034556-42044555 Glycine max
Glyma.19G159600 10.0kb downstream 10.0kb downstream 14580 true Chr19: 42044556-42059135 Glycine max
Glyma.19G159600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42049136-42059135 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304668 5265 Fabidae View MSA
124071742 5270 Rosid View MSA
123752422 5271 Pentapetalae View MSA
122797522 5272 Eudicot View MSA
122049366 5273 Angiosperm View MSA
121344195 5274 Embryophyte View MSA
123379996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.305888 0.0 1.14207    
cufflinks 5.5709 0.0 15.4771   High
cufflinks 0.373532 0.0 1.38181    
cufflinks 1.07035 0.0 3.66553    
cufflinks 0.753251 0.0 2.65991    
cufflinks 0.189022 0.0 0.721095 Low  
cufflinks 0.0563093 0.0 0.225245 Low Low
cufflinks 2.58451 0.0 7.84736    
cufflinks 1.54921 0.0 5.06631    
cufflinks 2.096       High
cufflinks 0.146        
cufflinks 0.364        
cufflinks 0.052     Low Low
cufflinks 0.157        
cufflinks 0.495        
cufflinks 0.841        
cufflinks 0.12       Low
cufflinks 0.201        
cufflinks 3.149       High
cufflinks 1.004        
cufflinks 0.248        
cufflinks 0.537        
cufflinks 0.498        
cufflinks 0.372        
cufflinks 0.967        
cufflinks 0.097       Low

0 Strain