Gene : Glyma.04G093900 G. max Wm82.a2.v1
Defline:  (1 of 185) PTHR11945 - MADS BOX PROTEIN Genomic Order:  939
Name:  ? Glyma.04G093900 Secondary Identifier:  ? PAC:30487526
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G093900 0.5kb upstream 0.5kb upstream 701 true Chr04: 8354579-8355279 Glycine max
Glyma.04G093900 0.5kb upstream 0.5kb upstream 500 false Chr04: 8354780-8355279 Glycine max
Glyma.04G093900 0.5kb downstream 0.5kb downstream 701 true Chr04: 8354079-8354779 Glycine max
Glyma.04G093900 0.5kb downstream 0.5kb downstream 500 false Chr04: 8354079-8354578 Glycine max
Glyma.04G093900 1.0kb upstream 1.0kb upstream 1201 true Chr04: 8354579-8355779 Glycine max
Glyma.04G093900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8354780-8355779 Glycine max
Glyma.04G093900 1.0kb downstream 1.0kb downstream 1201 true Chr04: 8353579-8354779 Glycine max
Glyma.04G093900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8353579-8354578 Glycine max
Glyma.04G093900 2.0kb upstream 2.0kb upstream 2201 true Chr04: 8354579-8356779 Glycine max
Glyma.04G093900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8354780-8356779 Glycine max
Glyma.04G093900 2.0kb downstream 2.0kb downstream 2201 true Chr04: 8352579-8354779 Glycine max
Glyma.04G093900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8352579-8354578 Glycine max
Glyma.04G093900 5.0kb upstream 5.0kb upstream 5201 true Chr04: 8354579-8359779 Glycine max
Glyma.04G093900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8354780-8359779 Glycine max
Glyma.04G093900 5.0kb downstream 5.0kb downstream 5201 true Chr04: 8349579-8354779 Glycine max
Glyma.04G093900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8349579-8354578 Glycine max
Glyma.04G093900 10.0kb upstream 10.0kb upstream 10201 true Chr04: 8354579-8364779 Glycine max
Glyma.04G093900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8354780-8364779 Glycine max
Glyma.04G093900 10.0kb downstream 10.0kb downstream 10201 true Chr04: 8344579-8354779 Glycine max
Glyma.04G093900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8344579-8354578 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311203 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.186        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.4       High
cufflinks 0.113        
cufflinks 0.093     Low  
cufflinks 0.192        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.143        

0 Strain