Gene : Glyma.04G097400 G. max Wm82.a2.v1
Defline:  (1 of 701) PF01535 - PPR repeat (PPR) Genomic Order:  974
Name:  ? Glyma.04G097400 Secondary Identifier:  ? PAC:30489738
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G097400 0.5kb upstream 0.5kb upstream 3681 true Chr04: 8815340-8819020 Glycine max
Glyma.04G097400 0.5kb upstream 0.5kb upstream 500 false Chr04: 8818521-8819020 Glycine max
Glyma.04G097400 0.5kb downstream 0.5kb downstream 3681 true Chr04: 8814840-8818520 Glycine max
Glyma.04G097400 0.5kb downstream 0.5kb downstream 500 false Chr04: 8814840-8815339 Glycine max
Glyma.04G097400 1.0kb upstream 1.0kb upstream 4181 true Chr04: 8815340-8819520 Glycine max
Glyma.04G097400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8818521-8819520 Glycine max
Glyma.04G097400 1.0kb downstream 1.0kb downstream 4181 true Chr04: 8814340-8818520 Glycine max
Glyma.04G097400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8814340-8815339 Glycine max
Glyma.04G097400 2.0kb upstream 2.0kb upstream 5181 true Chr04: 8815340-8820520 Glycine max
Glyma.04G097400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8818521-8820520 Glycine max
Glyma.04G097400 2.0kb downstream 2.0kb downstream 5181 true Chr04: 8813340-8818520 Glycine max
Glyma.04G097400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8813340-8815339 Glycine max
Glyma.04G097400 5.0kb upstream 5.0kb upstream 8181 true Chr04: 8815340-8823520 Glycine max
Glyma.04G097400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8818521-8823520 Glycine max
Glyma.04G097400 5.0kb downstream 5.0kb downstream 8181 true Chr04: 8810340-8818520 Glycine max
Glyma.04G097400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8810340-8815339 Glycine max
Glyma.04G097400 10.0kb upstream 10.0kb upstream 13181 true Chr04: 8815340-8828520 Glycine max
Glyma.04G097400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8818521-8828520 Glycine max
Glyma.04G097400 10.0kb downstream 10.0kb downstream 13181 true Chr04: 8805340-8818520 Glycine max
Glyma.04G097400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8805340-8815339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307467 5265 Fabidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.40829 0.0 7.60331    
cufflinks 2.60809 0.0 8.13161    
cufflinks 2.9152 0.0 8.91764    
cufflinks 2.21371 0.0 7.06054    
cufflinks 1.43779 0.0 4.8645   Low
cufflinks 1.67178 0.0 5.54343    
cufflinks 4.31067 0.0 12.5877   High
cufflinks 2.44612 0.0 7.69192    
cufflinks 1.06155 0.0 3.7003   Low
cufflinks 2.35        
cufflinks 1.104       Low
cufflinks 3.805       High
cufflinks 1.528        
cufflinks 1.334       Low
cufflinks 1.644        
cufflinks 2.643        
cufflinks 1.489        
cufflinks 3.988       High
cufflinks 3.337        
cufflinks 3.582       High
cufflinks 1.301       Low
cufflinks 3.845       High
cufflinks 2.792        
cufflinks 1.376        
cufflinks 3.378        
cufflinks 1.224       Low

0 Strain