Gene : Glyma.19G160900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR16223:SF15 - TRANSCRIPTION FACTOR UNE12-RELATED Genomic Order:  1609
Name:  ? Glyma.19G160900 Secondary Identifier:  ? PAC:30511624
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G160900 0.5kb upstream 0.5kb upstream 4704 true Chr19: 42159754-42164457 Glycine max
Glyma.19G160900 0.5kb upstream 0.5kb upstream 500 false Chr19: 42159754-42160253 Glycine max
Glyma.19G160900 0.5kb downstream 0.5kb downstream 4704 true Chr19: 42160254-42164957 Glycine max
Glyma.19G160900 0.5kb downstream 0.5kb downstream 500 false Chr19: 42164458-42164957 Glycine max
Glyma.19G160900 1.0kb upstream 1.0kb upstream 5204 true Chr19: 42159254-42164457 Glycine max
Glyma.19G160900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42159254-42160253 Glycine max
Glyma.19G160900 1.0kb downstream 1.0kb downstream 5204 true Chr19: 42160254-42165457 Glycine max
Glyma.19G160900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42164458-42165457 Glycine max
Glyma.19G160900 2.0kb upstream 2.0kb upstream 6204 true Chr19: 42158254-42164457 Glycine max
Glyma.19G160900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42158254-42160253 Glycine max
Glyma.19G160900 2.0kb downstream 2.0kb downstream 6204 true Chr19: 42160254-42166457 Glycine max
Glyma.19G160900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42164458-42166457 Glycine max
Glyma.19G160900 5.0kb upstream 5.0kb upstream 9204 true Chr19: 42155254-42164457 Glycine max
Glyma.19G160900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42155254-42160253 Glycine max
Glyma.19G160900 5.0kb downstream 5.0kb downstream 9204 true Chr19: 42160254-42169457 Glycine max
Glyma.19G160900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42164458-42169457 Glycine max
Glyma.19G160900 10.0kb upstream 10.0kb upstream 14204 true Chr19: 42150254-42164457 Glycine max
Glyma.19G160900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42150254-42160253 Glycine max
Glyma.19G160900 10.0kb downstream 10.0kb downstream 14204 true Chr19: 42160254-42174457 Glycine max
Glyma.19G160900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42164458-42174457 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311484 5265 Fabidae View MSA
124069060 5270 Rosid View MSA
123741046 5271 Pentapetalae View MSA
122795444 5272 Eudicot View MSA
122046496 5273 Angiosperm View MSA
121350974 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7006 0.0 39.2498    
cufflinks 14.7909 0.0 39.493    
cufflinks 10.6493 0.0 28.7466    
cufflinks 12.3937 0.0 33.2199    
cufflinks 13.6689 0.0 36.5173    
cufflinks 6.49005 0.0 18.0846   Low
cufflinks 9.0189 0.0 24.5093    
cufflinks 36.6421 0.0 101.099 High High
cufflinks 11.7213 0.0 31.4554    
cufflinks 6.33       High
cufflinks 2.9       Low
cufflinks 3.886        
cufflinks 3.324        
cufflinks 2.346       Low
cufflinks 3.166        
cufflinks 4.891        
cufflinks 4.159        
cufflinks 3.275        
cufflinks 4.914       High
cufflinks 4.296        
cufflinks 3.856        
cufflinks 4.854        
cufflinks 4.863        
cufflinks 3.633        
cufflinks 3.362        
cufflinks 3.148        

0 Strain