Gene : Glyma.04G103400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00085//PF13181//PF13371//PF13414 - Thioredoxin (Thioredoxin) // Tetratricopeptide repeat (TPR_8) // Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) Genomic Order:  1034
Name:  ? Glyma.04G103400 Secondary Identifier:  ? PAC:30490363
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G103400 0.5kb upstream 0.5kb upstream 4350 true Chr04: 9610725-9615074 Glycine max
Glyma.04G103400 0.5kb upstream 0.5kb upstream 500 false Chr04: 9610725-9611224 Glycine max
Glyma.04G103400 0.5kb downstream 0.5kb downstream 4350 true Chr04: 9611225-9615574 Glycine max
Glyma.04G103400 0.5kb downstream 0.5kb downstream 500 false Chr04: 9615075-9615574 Glycine max
Glyma.04G103400 1.0kb upstream 1.0kb upstream 4850 true Chr04: 9610225-9615074 Glycine max
Glyma.04G103400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9610225-9611224 Glycine max
Glyma.04G103400 1.0kb downstream 1.0kb downstream 4850 true Chr04: 9611225-9616074 Glycine max
Glyma.04G103400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9615075-9616074 Glycine max
Glyma.04G103400 2.0kb upstream 2.0kb upstream 5850 true Chr04: 9609225-9615074 Glycine max
Glyma.04G103400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9609225-9611224 Glycine max
Glyma.04G103400 2.0kb downstream 2.0kb downstream 5850 true Chr04: 9611225-9617074 Glycine max
Glyma.04G103400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9615075-9617074 Glycine max
Glyma.04G103400 5.0kb upstream 5.0kb upstream 8850 true Chr04: 9606225-9615074 Glycine max
Glyma.04G103400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9606225-9611224 Glycine max
Glyma.04G103400 5.0kb downstream 5.0kb downstream 8850 true Chr04: 9611225-9620074 Glycine max
Glyma.04G103400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9615075-9620074 Glycine max
Glyma.04G103400 10.0kb upstream 10.0kb upstream 13850 true Chr04: 9601225-9615074 Glycine max
Glyma.04G103400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9601225-9611224 Glycine max
Glyma.04G103400 10.0kb downstream 10.0kb downstream 13850 true Chr04: 9611225-9625074 Glycine max
Glyma.04G103400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9615075-9625074 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311538 5265 Fabidae View MSA
124069860 5270 Rosid View MSA
123742749 5271 Pentapetalae View MSA
122798057 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3189 0.0 32.9435   High
cufflinks 0.447308 0.0 1.60614   Low
cufflinks 2.06502 0.0 6.19109    
cufflinks 1.77506 0.0 5.44607    
cufflinks 2.74011 0.0 7.95276    
cufflinks 12.4021 0.0 33.1721   High
cufflinks 1.13168 0.0 3.71316    
cufflinks 10.5516 0.0 28.1597    
cufflinks 5.53086 0.0 15.0108    
cufflinks 3.26        
cufflinks 9.353     High  
cufflinks 1.969        
cufflinks 16.014     High  
cufflinks 1.539        
cufflinks 203.944     High High
cufflinks 0.632        
cufflinks 13.518     High  
cufflinks 0.36       Low
cufflinks 0.354       Low
cufflinks 0.372       Low
cufflinks 8.286     High  
cufflinks 0.667        
cufflinks 0.573        
cufflinks 7.651     High  
cufflinks 0.487        
cufflinks 22.525     High High

0 Strain