Gene : Glyma.19G161100 G. max Wm82.a2.v1
Defline:  (1 of 98) PF02309 - AUX/IAA family (AUX_IAA) Genomic Order:  1611
Name:  ? Glyma.19G161100 Secondary Identifier:  ? PAC:30512029
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G161100 0.5kb upstream 0.5kb upstream 4630 true Chr19: 42187296-42191925 Glycine max
Glyma.19G161100 0.5kb upstream 0.5kb upstream 500 false Chr19: 42187296-42187795 Glycine max
Glyma.19G161100 0.5kb downstream 0.5kb downstream 4630 true Chr19: 42187796-42192425 Glycine max
Glyma.19G161100 0.5kb downstream 0.5kb downstream 500 false Chr19: 42191926-42192425 Glycine max
Glyma.19G161100 1.0kb upstream 1.0kb upstream 5130 true Chr19: 42186796-42191925 Glycine max
Glyma.19G161100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42186796-42187795 Glycine max
Glyma.19G161100 1.0kb downstream 1.0kb downstream 5130 true Chr19: 42187796-42192925 Glycine max
Glyma.19G161100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42191926-42192925 Glycine max
Glyma.19G161100 2.0kb upstream 2.0kb upstream 6130 true Chr19: 42185796-42191925 Glycine max
Glyma.19G161100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42185796-42187795 Glycine max
Glyma.19G161100 2.0kb downstream 2.0kb downstream 6130 true Chr19: 42187796-42193925 Glycine max
Glyma.19G161100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42191926-42193925 Glycine max
Glyma.19G161100 5.0kb upstream 5.0kb upstream 9130 true Chr19: 42182796-42191925 Glycine max
Glyma.19G161100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42182796-42187795 Glycine max
Glyma.19G161100 5.0kb downstream 5.0kb downstream 9130 true Chr19: 42187796-42196925 Glycine max
Glyma.19G161100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42191926-42196925 Glycine max
Glyma.19G161100 10.0kb upstream 10.0kb upstream 14130 true Chr19: 42177796-42191925 Glycine max
Glyma.19G161100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42177796-42187795 Glycine max
Glyma.19G161100 10.0kb downstream 10.0kb downstream 14130 true Chr19: 42187796-42201925 Glycine max
Glyma.19G161100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42191926-42201925 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309367 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.13225 0.0 19.8663    
cufflinks 9.82724 0.0 26.7064    
cufflinks 47.9629 0.0 135.252 High  
cufflinks 19.7258 0.0 52.6536    
cufflinks 81.6954 0.0 246.941 High  
cufflinks 46.1001 0.0 129.126 High  
cufflinks 0.152698 0.0 0.595278 Low Low
cufflinks 37.752 0.0 103.915 High  
cufflinks 23.6214 0.0 63.2817 High  
cufflinks 53.177     High High
cufflinks 0.492       Low
cufflinks 15.153     High  
cufflinks 19.066     High  
cufflinks 29.873     High High
cufflinks 0.186       Low
cufflinks 11.473     High  
cufflinks 0.999        
cufflinks 23.291     High High
cufflinks 0.695        
cufflinks 5.431        
cufflinks 1.724        
cufflinks 6.584        
cufflinks 0.841        
cufflinks 0.487       Low
cufflinks 11.913     High  
cufflinks 3.855        

0 Strain