Gene : Glyma.04G101500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  1015
Name:  ? Glyma.04G101500 Secondary Identifier:  ? PAC:30489862
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G101500 0.5kb upstream 0.5kb upstream 5018 true Chr04: 9337214-9342231 Glycine max
Glyma.04G101500 0.5kb upstream 0.5kb upstream 500 false Chr04: 9341732-9342231 Glycine max
Glyma.04G101500 0.5kb downstream 0.5kb downstream 5018 true Chr04: 9336714-9341731 Glycine max
Glyma.04G101500 0.5kb downstream 0.5kb downstream 500 false Chr04: 9336714-9337213 Glycine max
Glyma.04G101500 1.0kb upstream 1.0kb upstream 5518 true Chr04: 9337214-9342731 Glycine max
Glyma.04G101500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9341732-9342731 Glycine max
Glyma.04G101500 1.0kb downstream 1.0kb downstream 5518 true Chr04: 9336214-9341731 Glycine max
Glyma.04G101500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9336214-9337213 Glycine max
Glyma.04G101500 2.0kb upstream 2.0kb upstream 6518 true Chr04: 9337214-9343731 Glycine max
Glyma.04G101500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9341732-9343731 Glycine max
Glyma.04G101500 2.0kb downstream 2.0kb downstream 6518 true Chr04: 9335214-9341731 Glycine max
Glyma.04G101500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9335214-9337213 Glycine max
Glyma.04G101500 5.0kb upstream 5.0kb upstream 9518 true Chr04: 9337214-9346731 Glycine max
Glyma.04G101500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9341732-9346731 Glycine max
Glyma.04G101500 5.0kb downstream 5.0kb downstream 9518 true Chr04: 9332214-9341731 Glycine max
Glyma.04G101500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9332214-9337213 Glycine max
Glyma.04G101500 10.0kb upstream 10.0kb upstream 14518 true Chr04: 9337214-9351731 Glycine max
Glyma.04G101500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9341732-9351731 Glycine max
Glyma.04G101500 10.0kb downstream 10.0kb downstream 14518 true Chr04: 9327214-9341731 Glycine max
Glyma.04G101500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9327214-9337213 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314673 5265 Fabidae View MSA
124068248 5270 Rosid View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.8955 0.0 152.104 High High
cufflinks 16.1448 0.0 49.8841    
cufflinks 13.0126 0.0 39.4564    
cufflinks 9.4537 0.0 28.0196    
cufflinks 1.62742 0.0 5.14683   Low
cufflinks 1.30807 0.0 4.4343   Low
cufflinks 6.51328 0.0 19.7042    
cufflinks 13.9283 0.0 42.3858    
cufflinks 1.54524 0.0 4.91674   Low
cufflinks 16.137     High  
cufflinks 0.107       Low
cufflinks 11.874     High  
cufflinks 0.137       Low
cufflinks 0.094       Low
cufflinks 0.503        
cufflinks 32.011     High High
cufflinks 1.789        
cufflinks 8.65     High  
cufflinks 17.592     High  
cufflinks 36.115     High High
cufflinks 0.62        
cufflinks 34.034     High High
cufflinks 19.971     High  
cufflinks 0.293        
cufflinks 34.613     High High
cufflinks 0.176       Low

0 Strain