Gene : Glyma.04G100300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31279:SF3 - (PHI-1) PROTEIN, PUTATIVE-RELATED Genomic Order:  1003
Name:  ? Glyma.04G100300 Secondary Identifier:  ? PAC:30489516
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G100300 0.5kb upstream 0.5kb upstream 1816 true Chr04: 9196679-9198494 Glycine max
Glyma.04G100300 0.5kb upstream 0.5kb upstream 500 false Chr04: 9197995-9198494 Glycine max
Glyma.04G100300 0.5kb downstream 0.5kb downstream 1816 true Chr04: 9196179-9197994 Glycine max
Glyma.04G100300 0.5kb downstream 0.5kb downstream 500 false Chr04: 9196179-9196678 Glycine max
Glyma.04G100300 1.0kb upstream 1.0kb upstream 2316 true Chr04: 9196679-9198994 Glycine max
Glyma.04G100300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9197995-9198994 Glycine max
Glyma.04G100300 1.0kb downstream 1.0kb downstream 2316 true Chr04: 9195679-9197994 Glycine max
Glyma.04G100300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9195679-9196678 Glycine max
Glyma.04G100300 2.0kb upstream 2.0kb upstream 3316 true Chr04: 9196679-9199994 Glycine max
Glyma.04G100300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9197995-9199994 Glycine max
Glyma.04G100300 2.0kb downstream 2.0kb downstream 3316 true Chr04: 9194679-9197994 Glycine max
Glyma.04G100300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9194679-9196678 Glycine max
Glyma.04G100300 5.0kb upstream 5.0kb upstream 6316 true Chr04: 9196679-9202994 Glycine max
Glyma.04G100300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9197995-9202994 Glycine max
Glyma.04G100300 5.0kb downstream 5.0kb downstream 6316 true Chr04: 9191679-9197994 Glycine max
Glyma.04G100300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9191679-9196678 Glycine max
Glyma.04G100300 10.0kb upstream 10.0kb upstream 11316 true Chr04: 9196679-9207994 Glycine max
Glyma.04G100300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9197995-9207994 Glycine max
Glyma.04G100300 10.0kb downstream 10.0kb downstream 11316 true Chr04: 9186679-9197994 Glycine max
Glyma.04G100300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9186679-9196678 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298218 5265 Fabidae View MSA
124074854 5270 Rosid View MSA
123747459 5271 Pentapetalae View MSA
122794383 5272 Eudicot View MSA
122046837 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3739 0.0 28.9962   High
cufflinks 1.91293 0.0 6.65516    
cufflinks 5.09924 0.0 15.7274    
cufflinks 2.81659 0.0 9.36838    
cufflinks 2.98792 0.0 9.77706    
cufflinks 5.01951 0.0 15.3387    
cufflinks 0.611874 0.0 2.28118   Low
cufflinks 1.43194 0.0 5.0834    
cufflinks 2.37975 0.0 8.05082    
cufflinks 15.936     High  
cufflinks 27.522     High  
cufflinks 25.846     High  
cufflinks 9.038     High  
cufflinks 1.201       Low
cufflinks 87.562     High High
cufflinks 8.953     High  
cufflinks 38.137     High High
cufflinks 28.56     High  
cufflinks 1.712       Low
cufflinks 2.963        
cufflinks 8.663     High  
cufflinks 3.341        
cufflinks 2.048       Low
cufflinks 9.213     High  
cufflinks 2.087       Low
cufflinks 27.916     High  

0 Strain