Gene : Glyma.04G111900 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR11208 - RNA-BINDING PROTEIN RELATED Genomic Order:  1119
Name:  ? Glyma.04G111900 Secondary Identifier:  ? PAC:30490350
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G111900 0.5kb upstream 0.5kb upstream 8472 true Chr04: 12489435-12497906 Glycine max
Glyma.04G111900 0.5kb upstream 0.5kb upstream 500 false Chr04: 12489435-12489934 Glycine max
Glyma.04G111900 0.5kb downstream 0.5kb downstream 8472 true Chr04: 12489935-12498406 Glycine max
Glyma.04G111900 0.5kb downstream 0.5kb downstream 500 false Chr04: 12497907-12498406 Glycine max
Glyma.04G111900 1.0kb upstream 1.0kb upstream 8972 true Chr04: 12488935-12497906 Glycine max
Glyma.04G111900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12488935-12489934 Glycine max
Glyma.04G111900 1.0kb downstream 1.0kb downstream 8972 true Chr04: 12489935-12498906 Glycine max
Glyma.04G111900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12497907-12498906 Glycine max
Glyma.04G111900 2.0kb upstream 2.0kb upstream 9972 true Chr04: 12487935-12497906 Glycine max
Glyma.04G111900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12487935-12489934 Glycine max
Glyma.04G111900 2.0kb downstream 2.0kb downstream 9972 true Chr04: 12489935-12499906 Glycine max
Glyma.04G111900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12497907-12499906 Glycine max
Glyma.04G111900 5.0kb upstream 5.0kb upstream 12972 true Chr04: 12484935-12497906 Glycine max
Glyma.04G111900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12484935-12489934 Glycine max
Glyma.04G111900 5.0kb downstream 5.0kb downstream 12972 true Chr04: 12489935-12502906 Glycine max
Glyma.04G111900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12497907-12502906 Glycine max
Glyma.04G111900 10.0kb upstream 10.0kb upstream 17972 true Chr04: 12479935-12497906 Glycine max
Glyma.04G111900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12479935-12489934 Glycine max
Glyma.04G111900 10.0kb downstream 10.0kb downstream 17972 true Chr04: 12489935-12507906 Glycine max
Glyma.04G111900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12497907-12507906 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302337 5265 Fabidae View MSA
124061318 5270 Rosid View MSA
123738664 5271 Pentapetalae View MSA
122792934 5272 Eudicot View MSA
122044537 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.90741 0.0 30.5401   Low
cufflinks 9.58966 0.0 36.5579    
cufflinks 5.60554 0.0 20.9526   Low
cufflinks 16.8529 0.0 58.7069    
cufflinks 14.2265 0.0 49.7867    
cufflinks 15.5488 0.0 47.0432    
cufflinks 17.0905 0.0 59.444    
cufflinks 16.7076 0.0 50.0054    
cufflinks 17.3967 0.0 60.2686    
cufflinks 1.017        
cufflinks 0.428       Low
cufflinks 0.597        
cufflinks 0.702        
cufflinks 0.634        
cufflinks 2.746       High
cufflinks 0.561        
cufflinks 0.873        
cufflinks 0.816        
cufflinks 0.966        
cufflinks 0.549        
cufflinks 0.663        
cufflinks 0.551        
cufflinks 0.535        
cufflinks 0.516        
cufflinks 0.58        
cufflinks 0.677        

0 Strain