Gene : Glyma.19G162500 G. max Wm82.a2.v1
Defline:  (1 of 91) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  1625
Name:  ? Glyma.19G162500 Secondary Identifier:  ? PAC:30514143
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G162500 0.5kb upstream 0.5kb upstream 1661 true Chr19: 42327358-42329018 Glycine max
Glyma.19G162500 0.5kb upstream 0.5kb upstream 500 false Chr19: 42327358-42327857 Glycine max
Glyma.19G162500 0.5kb downstream 0.5kb downstream 1661 true Chr19: 42327858-42329518 Glycine max
Glyma.19G162500 0.5kb downstream 0.5kb downstream 500 false Chr19: 42329019-42329518 Glycine max
Glyma.19G162500 1.0kb upstream 1.0kb upstream 2161 true Chr19: 42326858-42329018 Glycine max
Glyma.19G162500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42326858-42327857 Glycine max
Glyma.19G162500 1.0kb downstream 1.0kb downstream 2161 true Chr19: 42327858-42330018 Glycine max
Glyma.19G162500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42329019-42330018 Glycine max
Glyma.19G162500 2.0kb upstream 2.0kb upstream 3161 true Chr19: 42325858-42329018 Glycine max
Glyma.19G162500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42325858-42327857 Glycine max
Glyma.19G162500 2.0kb downstream 2.0kb downstream 3161 true Chr19: 42327858-42331018 Glycine max
Glyma.19G162500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42329019-42331018 Glycine max
Glyma.19G162500 5.0kb upstream 5.0kb upstream 6161 true Chr19: 42322858-42329018 Glycine max
Glyma.19G162500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42322858-42327857 Glycine max
Glyma.19G162500 5.0kb downstream 5.0kb downstream 6161 true Chr19: 42327858-42334018 Glycine max
Glyma.19G162500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42329019-42334018 Glycine max
Glyma.19G162500 10.0kb upstream 10.0kb upstream 11161 true Chr19: 42317858-42329018 Glycine max
Glyma.19G162500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42317858-42327857 Glycine max
Glyma.19G162500 10.0kb downstream 10.0kb downstream 11161 true Chr19: 42327858-42339018 Glycine max
Glyma.19G162500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42329019-42339018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255140 5265 Fabidae View MSA
124063773 5270 Rosid View MSA
123750895 5271 Pentapetalae View MSA
122785947 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.247583 0.0 0.96629    
cufflinks 0.647069 0.0 2.42534   High
cufflinks 0.0554266 0.0 0.231952 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.152242 0.0 0.605986 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0211387 0.0 0.0956103 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.438        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.142       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.25        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain