Gene : Glyma.19G163000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Genomic Order:  1630
Name:  ? Glyma.19G163000 Secondary Identifier:  ? PAC:30513151
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G163000 0.5kb upstream 0.5kb upstream 1664 true Chr19: 42374752-42376415 Glycine max
Glyma.19G163000 0.5kb upstream 0.5kb upstream 500 false Chr19: 42375916-42376415 Glycine max
Glyma.19G163000 0.5kb downstream 0.5kb downstream 1664 true Chr19: 42374252-42375915 Glycine max
Glyma.19G163000 0.5kb downstream 0.5kb downstream 500 false Chr19: 42374252-42374751 Glycine max
Glyma.19G163000 1.0kb upstream 1.0kb upstream 2164 true Chr19: 42374752-42376915 Glycine max
Glyma.19G163000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42375916-42376915 Glycine max
Glyma.19G163000 1.0kb downstream 1.0kb downstream 2164 true Chr19: 42373752-42375915 Glycine max
Glyma.19G163000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42373752-42374751 Glycine max
Glyma.19G163000 2.0kb upstream 2.0kb upstream 3164 true Chr19: 42374752-42377915 Glycine max
Glyma.19G163000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42375916-42377915 Glycine max
Glyma.19G163000 2.0kb downstream 2.0kb downstream 3164 true Chr19: 42372752-42375915 Glycine max
Glyma.19G163000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42372752-42374751 Glycine max
Glyma.19G163000 5.0kb upstream 5.0kb upstream 6164 true Chr19: 42374752-42380915 Glycine max
Glyma.19G163000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42375916-42380915 Glycine max
Glyma.19G163000 5.0kb downstream 5.0kb downstream 6164 true Chr19: 42369752-42375915 Glycine max
Glyma.19G163000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42369752-42374751 Glycine max
Glyma.19G163000 10.0kb upstream 10.0kb upstream 11164 true Chr19: 42374752-42385915 Glycine max
Glyma.19G163000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42375916-42385915 Glycine max
Glyma.19G163000 10.0kb downstream 10.0kb downstream 11164 true Chr19: 42364752-42375915 Glycine max
Glyma.19G163000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42364752-42374751 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
122313748 5265 Fabidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0237554 0.0 0.107731 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.01662 0.0 3.75692    
cufflinks 1.15202 0.0 4.22664    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.900648 0.0 3.34146    
cufflinks 1.16758 0.0 4.27667    
cufflinks 0.098     Low  
cufflinks 0.049     Low  
cufflinks 0.014     Low Low
cufflinks 1.365       High
cufflinks 0.276        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.583        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.244        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.859       High

0 Strain