Gene : Glyma.04G115900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 Genomic Order:  1159
Name:  ? Glyma.04G115900 Secondary Identifier:  ? PAC:30487445
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G115900 0.5kb upstream 0.5kb upstream 11131 true Chr04: 13322627-13333757 Glycine max
Glyma.04G115900 0.5kb upstream 0.5kb upstream 500 false Chr04: 13322627-13323126 Glycine max
Glyma.04G115900 0.5kb downstream 0.5kb downstream 11131 true Chr04: 13323127-13334257 Glycine max
Glyma.04G115900 0.5kb downstream 0.5kb downstream 500 false Chr04: 13333758-13334257 Glycine max
Glyma.04G115900 1.0kb upstream 1.0kb upstream 11631 true Chr04: 13322127-13333757 Glycine max
Glyma.04G115900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13322127-13323126 Glycine max
Glyma.04G115900 1.0kb downstream 1.0kb downstream 11631 true Chr04: 13323127-13334757 Glycine max
Glyma.04G115900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13333758-13334757 Glycine max
Glyma.04G115900 2.0kb upstream 2.0kb upstream 12631 true Chr04: 13321127-13333757 Glycine max
Glyma.04G115900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13321127-13323126 Glycine max
Glyma.04G115900 2.0kb downstream 2.0kb downstream 12631 true Chr04: 13323127-13335757 Glycine max
Glyma.04G115900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13333758-13335757 Glycine max
Glyma.04G115900 5.0kb upstream 5.0kb upstream 15631 true Chr04: 13318127-13333757 Glycine max
Glyma.04G115900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13318127-13323126 Glycine max
Glyma.04G115900 5.0kb downstream 5.0kb downstream 15631 true Chr04: 13323127-13338757 Glycine max
Glyma.04G115900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13333758-13338757 Glycine max
Glyma.04G115900 10.0kb upstream 10.0kb upstream 20631 true Chr04: 13313127-13333757 Glycine max
Glyma.04G115900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13313127-13323126 Glycine max
Glyma.04G115900 10.0kb downstream 10.0kb downstream 20631 true Chr04: 13323127-13343757 Glycine max
Glyma.04G115900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13333758-13343757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302157 5265 Fabidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8381 0.0 42.5851    
cufflinks 19.8629 0.0 53.0626    
cufflinks 14.3432 0.0 38.6808    
cufflinks 20.7564 0.0 55.4031 High High
cufflinks 15.3077 0.0 41.1866    
cufflinks 14.329 0.0 38.6873    
cufflinks 21.703 0.0 57.9127   High
cufflinks 19.5638 0.0 52.2634    
cufflinks 13.5623 0.0 36.7099   Low
cufflinks 1.436        
cufflinks 0.362       Low
cufflinks 1.465        
cufflinks 1.414        
cufflinks 1.718        
cufflinks 0.306       Low
cufflinks 1.153        
cufflinks 0.877        
cufflinks 1.865       High
cufflinks 1.82       High
cufflinks 1.167        
cufflinks 0.652        
cufflinks 1.295        
cufflinks 1.4        
cufflinks 0.618        
cufflinks 1.138        
cufflinks 0.677        

0 Strain