Gene : Glyma.04G113700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34562:SF1 - WPP DOMAIN-INTERACTING PROTEIN 2-RELATED Genomic Order:  1137
Name:  ? Glyma.04G113700 Secondary Identifier:  ? PAC:30488429
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G113700 0.5kb upstream 0.5kb upstream 5050 true Chr04: 12908934-12913983 Glycine max
Glyma.04G113700 0.5kb upstream 0.5kb upstream 500 false Chr04: 12913484-12913983 Glycine max
Glyma.04G113700 0.5kb downstream 0.5kb downstream 5050 true Chr04: 12908434-12913483 Glycine max
Glyma.04G113700 0.5kb downstream 0.5kb downstream 500 false Chr04: 12908434-12908933 Glycine max
Glyma.04G113700 1.0kb upstream 1.0kb upstream 5550 true Chr04: 12908934-12914483 Glycine max
Glyma.04G113700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12913484-12914483 Glycine max
Glyma.04G113700 1.0kb downstream 1.0kb downstream 5550 true Chr04: 12907934-12913483 Glycine max
Glyma.04G113700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12907934-12908933 Glycine max
Glyma.04G113700 2.0kb upstream 2.0kb upstream 6550 true Chr04: 12908934-12915483 Glycine max
Glyma.04G113700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12913484-12915483 Glycine max
Glyma.04G113700 2.0kb downstream 2.0kb downstream 6550 true Chr04: 12906934-12913483 Glycine max
Glyma.04G113700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12906934-12908933 Glycine max
Glyma.04G113700 5.0kb upstream 5.0kb upstream 9550 true Chr04: 12908934-12918483 Glycine max
Glyma.04G113700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12913484-12918483 Glycine max
Glyma.04G113700 5.0kb downstream 5.0kb downstream 9550 true Chr04: 12903934-12913483 Glycine max
Glyma.04G113700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12903934-12908933 Glycine max
Glyma.04G113700 10.0kb upstream 10.0kb upstream 14550 true Chr04: 12908934-12923483 Glycine max
Glyma.04G113700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12913484-12923483 Glycine max
Glyma.04G113700 10.0kb downstream 10.0kb downstream 14550 true Chr04: 12898934-12913483 Glycine max
Glyma.04G113700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12898934-12908933 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301998 5265 Fabidae View MSA
124061399 5270 Rosid View MSA
123751814 5271 Pentapetalae View MSA
122794604 5272 Eudicot View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6438 0.0 43.7784    
cufflinks 10.6371 0.0 37.1482   Low
cufflinks 11.9858 0.0 41.4151    
cufflinks 12.2826 0.0 42.9492    
cufflinks 14.3135 0.0 49.497    
cufflinks 15.3727 0.0 53.3022   High
cufflinks 14.4347 0.0 50.1407    
cufflinks 14.3554 0.0 49.7445    
cufflinks 12.2568 0.0 42.3691    
cufflinks 3.761        
cufflinks 4.526        
cufflinks 3.963        
cufflinks 5.042        
cufflinks 7.263     High High
cufflinks 2.399       Low
cufflinks 3.638        
cufflinks 3.538        
cufflinks 5.386       High
cufflinks 3.916        
cufflinks 4.018        
cufflinks 4.091        
cufflinks 4.046        
cufflinks 3.357        
cufflinks 5.622       High
cufflinks 3.675        
cufflinks 3.943        

0 Strain