Gene : Glyma.19G164800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Genomic Order:  1648
Name:  ? Glyma.19G164800 Secondary Identifier:  ? PAC:30514674
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G164800 0.5kb upstream 0.5kb upstream 2830 true Chr19: 42559312-42562141 Glycine max
Glyma.19G164800 0.5kb upstream 0.5kb upstream 500 false Chr19: 42561642-42562141 Glycine max
Glyma.19G164800 0.5kb downstream 0.5kb downstream 2830 true Chr19: 42558812-42561641 Glycine max
Glyma.19G164800 0.5kb downstream 0.5kb downstream 500 false Chr19: 42558812-42559311 Glycine max
Glyma.19G164800 1.0kb upstream 1.0kb upstream 3330 true Chr19: 42559312-42562641 Glycine max
Glyma.19G164800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42561642-42562641 Glycine max
Glyma.19G164800 1.0kb downstream 1.0kb downstream 3330 true Chr19: 42558312-42561641 Glycine max
Glyma.19G164800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42558312-42559311 Glycine max
Glyma.19G164800 2.0kb upstream 2.0kb upstream 4330 true Chr19: 42559312-42563641 Glycine max
Glyma.19G164800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42561642-42563641 Glycine max
Glyma.19G164800 2.0kb downstream 2.0kb downstream 4330 true Chr19: 42557312-42561641 Glycine max
Glyma.19G164800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42557312-42559311 Glycine max
Glyma.19G164800 5.0kb upstream 5.0kb upstream 7330 true Chr19: 42559312-42566641 Glycine max
Glyma.19G164800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42561642-42566641 Glycine max
Glyma.19G164800 5.0kb downstream 5.0kb downstream 7330 true Chr19: 42554312-42561641 Glycine max
Glyma.19G164800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42554312-42559311 Glycine max
Glyma.19G164800 10.0kb upstream 10.0kb upstream 12330 true Chr19: 42559312-42571641 Glycine max
Glyma.19G164800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42561642-42571641 Glycine max
Glyma.19G164800 10.0kb downstream 10.0kb downstream 12330 true Chr19: 42549312-42561641 Glycine max
Glyma.19G164800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42549312-42559311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298286 5265 Fabidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0300857 0.0 0.124529 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.125186 0.0 0.487843 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.10561 0.0 19.4371   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain