Gene : Glyma.19G165200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1652
Name:  ? Glyma.19G165200 Secondary Identifier:  ? PAC:30514921
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G165200 0.5kb upstream 0.5kb upstream 5491 true Chr19: 42589385-42594875 Glycine max
Glyma.19G165200 0.5kb upstream 0.5kb upstream 500 false Chr19: 42589385-42589884 Glycine max
Glyma.19G165200 0.5kb downstream 0.5kb downstream 5491 true Chr19: 42589885-42595375 Glycine max
Glyma.19G165200 0.5kb downstream 0.5kb downstream 500 false Chr19: 42594876-42595375 Glycine max
Glyma.19G165200 1.0kb upstream 1.0kb upstream 5991 true Chr19: 42588885-42594875 Glycine max
Glyma.19G165200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42588885-42589884 Glycine max
Glyma.19G165200 1.0kb downstream 1.0kb downstream 5991 true Chr19: 42589885-42595875 Glycine max
Glyma.19G165200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42594876-42595875 Glycine max
Glyma.19G165200 2.0kb upstream 2.0kb upstream 6991 true Chr19: 42587885-42594875 Glycine max
Glyma.19G165200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42587885-42589884 Glycine max
Glyma.19G165200 2.0kb downstream 2.0kb downstream 6991 true Chr19: 42589885-42596875 Glycine max
Glyma.19G165200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42594876-42596875 Glycine max
Glyma.19G165200 5.0kb upstream 5.0kb upstream 9991 true Chr19: 42584885-42594875 Glycine max
Glyma.19G165200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42584885-42589884 Glycine max
Glyma.19G165200 5.0kb downstream 5.0kb downstream 9991 true Chr19: 42589885-42599875 Glycine max
Glyma.19G165200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42594876-42599875 Glycine max
Glyma.19G165200 10.0kb upstream 10.0kb upstream 14991 true Chr19: 42579885-42594875 Glycine max
Glyma.19G165200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42579885-42589884 Glycine max
Glyma.19G165200 10.0kb downstream 10.0kb downstream 14991 true Chr19: 42589885-42604875 Glycine max
Glyma.19G165200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42594876-42604875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306105 5265 Fabidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.877952 0.0 4.61373   Low
cufflinks 3.82773 0.0 14.6853    
cufflinks 2.91712 0.0 12.5037    
cufflinks 3.9075 0.0 15.1181    
cufflinks 1.60592 0.0 6.97767    
cufflinks 1.06698 0.0 3.94477   Low
cufflinks 7.90342 0.0 31.1408   High
cufflinks 4.19146 0.0 15.7385    
cufflinks 2.2384 0.0 8.69    
cufflinks 1.222       High
cufflinks 0.137       Low
cufflinks 0.756       High
cufflinks 0.327        
cufflinks 0.373        
cufflinks 0.194        
cufflinks 0.455        
cufflinks 0.264        
cufflinks 0.741       High
cufflinks 0.867       High
cufflinks 0.405        
cufflinks 0.156       Low
cufflinks 0.426        
cufflinks 0.425        
cufflinks 0.149       Low
cufflinks 0.407        
cufflinks 0.163       Low

0 Strain