Gene : Glyma.04G118500 G. max Wm82.a2.v1
Defline:  (1 of 14) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  1185
Name:  ? Glyma.04G118500 Secondary Identifier:  ? PAC:30489220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G118500 0.5kb upstream 0.5kb upstream 3885 true Chr04: 14019557-14023441 Glycine max
Glyma.04G118500 0.5kb upstream 0.5kb upstream 500 false Chr04: 14022942-14023441 Glycine max
Glyma.04G118500 0.5kb downstream 0.5kb downstream 3885 true Chr04: 14019057-14022941 Glycine max
Glyma.04G118500 0.5kb downstream 0.5kb downstream 500 false Chr04: 14019057-14019556 Glycine max
Glyma.04G118500 1.0kb upstream 1.0kb upstream 4385 true Chr04: 14019557-14023941 Glycine max
Glyma.04G118500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 14022942-14023941 Glycine max
Glyma.04G118500 1.0kb downstream 1.0kb downstream 4385 true Chr04: 14018557-14022941 Glycine max
Glyma.04G118500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 14018557-14019556 Glycine max
Glyma.04G118500 2.0kb upstream 2.0kb upstream 5385 true Chr04: 14019557-14024941 Glycine max
Glyma.04G118500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 14022942-14024941 Glycine max
Glyma.04G118500 2.0kb downstream 2.0kb downstream 5385 true Chr04: 14017557-14022941 Glycine max
Glyma.04G118500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 14017557-14019556 Glycine max
Glyma.04G118500 5.0kb upstream 5.0kb upstream 8385 true Chr04: 14019557-14027941 Glycine max
Glyma.04G118500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 14022942-14027941 Glycine max
Glyma.04G118500 5.0kb downstream 5.0kb downstream 8385 true Chr04: 14014557-14022941 Glycine max
Glyma.04G118500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 14014557-14019556 Glycine max
Glyma.04G118500 10.0kb upstream 10.0kb upstream 13385 true Chr04: 14019557-14032941 Glycine max
Glyma.04G118500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 14022942-14032941 Glycine max
Glyma.04G118500 10.0kb downstream 10.0kb downstream 13385 true Chr04: 14009557-14022941 Glycine max
Glyma.04G118500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 14009557-14019556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122250435 5265 Fabidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.76223E-4 0.0 0.00331893 Low  
cufflinks 2.71496E-6 0.0 3.0065E-4 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00886368 0.0 0.0401167 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain