Gene : Glyma.19G165500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  1655
Name:  ? Glyma.19G165500 Secondary Identifier:  ? PAC:30513377
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G165500 0.5kb upstream 0.5kb upstream 8646 true Chr19: 42636072-42644717 Glycine max
Glyma.19G165500 0.5kb upstream 0.5kb upstream 500 false Chr19: 42644218-42644717 Glycine max
Glyma.19G165500 0.5kb downstream 0.5kb downstream 8646 true Chr19: 42635572-42644217 Glycine max
Glyma.19G165500 0.5kb downstream 0.5kb downstream 500 false Chr19: 42635572-42636071 Glycine max
Glyma.19G165500 1.0kb upstream 1.0kb upstream 9146 true Chr19: 42636072-42645217 Glycine max
Glyma.19G165500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42644218-42645217 Glycine max
Glyma.19G165500 1.0kb downstream 1.0kb downstream 9146 true Chr19: 42635072-42644217 Glycine max
Glyma.19G165500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42635072-42636071 Glycine max
Glyma.19G165500 2.0kb upstream 2.0kb upstream 10146 true Chr19: 42636072-42646217 Glycine max
Glyma.19G165500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42644218-42646217 Glycine max
Glyma.19G165500 2.0kb downstream 2.0kb downstream 10146 true Chr19: 42634072-42644217 Glycine max
Glyma.19G165500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42634072-42636071 Glycine max
Glyma.19G165500 5.0kb upstream 5.0kb upstream 13146 true Chr19: 42636072-42649217 Glycine max
Glyma.19G165500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42644218-42649217 Glycine max
Glyma.19G165500 5.0kb downstream 5.0kb downstream 13146 true Chr19: 42631072-42644217 Glycine max
Glyma.19G165500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42631072-42636071 Glycine max
Glyma.19G165500 10.0kb upstream 10.0kb upstream 18146 true Chr19: 42636072-42654217 Glycine max
Glyma.19G165500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42644218-42654217 Glycine max
Glyma.19G165500 10.0kb downstream 10.0kb downstream 18146 true Chr19: 42626072-42644217 Glycine max
Glyma.19G165500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42626072-42636071 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309288 5265 Fabidae View MSA
124069719 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.26126 0.0 23.6402   High
cufflinks 3.73177 0.0 15.8667    
cufflinks 3.44406 0.0 15.0146    
cufflinks 2.87632 0.0 14.8386   Low
cufflinks 3.33977 0.0 23.2916    
cufflinks 3.32406 0.0 17.4965    
cufflinks 4.80559 0.0 19.44   High
cufflinks 3.98967 0.0 16.9023    
cufflinks 3.35872 0.0 16.1779    
cufflinks 0.164        
cufflinks 0.113       Low
cufflinks 0.306        
cufflinks 0.348        
cufflinks 0.371        
cufflinks 0.091       Low
cufflinks 0.326        
cufflinks 0.098       Low
cufflinks 0.39        
cufflinks 0.348        
cufflinks 0.356        
cufflinks 0.13       Low
cufflinks 0.366        
cufflinks 0.387        
cufflinks 0.158        
cufflinks 0.324        
cufflinks 0.126       Low

0 Strain