Gene : Glyma.04G124900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10688 - PWWP DOMAIN-CONTAINING PROTEIN Genomic Order:  1249
Name:  ? Glyma.04G124900 Secondary Identifier:  ? PAC:30487350
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G124900 0.5kb upstream 0.5kb upstream 3913 true Chr04: 16399212-16403124 Glycine max
Glyma.04G124900 0.5kb upstream 0.5kb upstream 500 false Chr04: 16402625-16403124 Glycine max
Glyma.04G124900 0.5kb downstream 0.5kb downstream 3913 true Chr04: 16398712-16402624 Glycine max
Glyma.04G124900 0.5kb downstream 0.5kb downstream 500 false Chr04: 16398712-16399211 Glycine max
Glyma.04G124900 1.0kb upstream 1.0kb upstream 4413 true Chr04: 16399212-16403624 Glycine max
Glyma.04G124900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 16402625-16403624 Glycine max
Glyma.04G124900 1.0kb downstream 1.0kb downstream 4413 true Chr04: 16398212-16402624 Glycine max
Glyma.04G124900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 16398212-16399211 Glycine max
Glyma.04G124900 2.0kb upstream 2.0kb upstream 5413 true Chr04: 16399212-16404624 Glycine max
Glyma.04G124900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 16402625-16404624 Glycine max
Glyma.04G124900 2.0kb downstream 2.0kb downstream 5413 true Chr04: 16397212-16402624 Glycine max
Glyma.04G124900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 16397212-16399211 Glycine max
Glyma.04G124900 5.0kb upstream 5.0kb upstream 8413 true Chr04: 16399212-16407624 Glycine max
Glyma.04G124900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 16402625-16407624 Glycine max
Glyma.04G124900 5.0kb downstream 5.0kb downstream 8413 true Chr04: 16394212-16402624 Glycine max
Glyma.04G124900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 16394212-16399211 Glycine max
Glyma.04G124900 10.0kb upstream 10.0kb upstream 13413 true Chr04: 16399212-16412624 Glycine max
Glyma.04G124900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 16402625-16412624 Glycine max
Glyma.04G124900 10.0kb downstream 10.0kb downstream 13413 true Chr04: 16389212-16402624 Glycine max
Glyma.04G124900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 16389212-16399211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656922 5273 Angiosperm View MSA
122253999 5265 Fabidae View MSA
124037752 5270 Rosid View MSA
123610478 5271 Pentapetalae View MSA
122645094 5272 Eudicot View MSA
120928979 5274 Embryophyte View MSA
122969563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.483278 0.0 1.74637    
cufflinks 0.573685 0.0 2.04772    
cufflinks 0.23771 0.0 0.891935    
cufflinks 0.463221 0.0 1.67612    
cufflinks 0.223798 0.0 0.842102 Low  
cufflinks 0.0747451 0.0 0.294503 Low Low
cufflinks 0.431414 0.0 1.57033    
cufflinks 0.628154 0.0 2.22565    
cufflinks 0.375371 0.0 1.37656    
cufflinks 0.293        
cufflinks 0.039     Low Low
cufflinks 0.445       High
cufflinks 0.161        
cufflinks 0.152        
cufflinks 0.115        
cufflinks 0.245        
cufflinks 0.087        
cufflinks 0.442       High
cufflinks 0.561       High
cufflinks 0.308        
cufflinks 0.041     Low Low
cufflinks 0.308        
cufflinks 0.428       High
cufflinks 0.057     Low Low
cufflinks 0.292        
cufflinks 0.074        

0 Strain