Gene : Glyma.19G203000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23041:SF64 - E3 UBIQUITIN-PROTEIN LIGASE BAH1 Genomic Order:  2030
Name:  ? Glyma.19G203000 Secondary Identifier:  ? PAC:30514397
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G203000 0.5kb upstream 0.5kb upstream 4232 true Chr19: 45980710-45984941 Glycine max
Glyma.19G203000 0.5kb upstream 0.5kb upstream 500 false Chr19: 45984442-45984941 Glycine max
Glyma.19G203000 0.5kb downstream 0.5kb downstream 4232 true Chr19: 45980210-45984441 Glycine max
Glyma.19G203000 0.5kb downstream 0.5kb downstream 500 false Chr19: 45980210-45980709 Glycine max
Glyma.19G203000 1.0kb upstream 1.0kb upstream 4732 true Chr19: 45980710-45985441 Glycine max
Glyma.19G203000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45984442-45985441 Glycine max
Glyma.19G203000 1.0kb downstream 1.0kb downstream 4732 true Chr19: 45979710-45984441 Glycine max
Glyma.19G203000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45979710-45980709 Glycine max
Glyma.19G203000 2.0kb upstream 2.0kb upstream 5732 true Chr19: 45980710-45986441 Glycine max
Glyma.19G203000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45984442-45986441 Glycine max
Glyma.19G203000 2.0kb downstream 2.0kb downstream 5732 true Chr19: 45978710-45984441 Glycine max
Glyma.19G203000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45978710-45980709 Glycine max
Glyma.19G203000 5.0kb upstream 5.0kb upstream 8732 true Chr19: 45980710-45989441 Glycine max
Glyma.19G203000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45984442-45989441 Glycine max
Glyma.19G203000 5.0kb downstream 5.0kb downstream 8732 true Chr19: 45975710-45984441 Glycine max
Glyma.19G203000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45975710-45980709 Glycine max
Glyma.19G203000 10.0kb upstream 10.0kb upstream 13732 true Chr19: 45980710-45994441 Glycine max
Glyma.19G203000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45984442-45994441 Glycine max
Glyma.19G203000 10.0kb downstream 10.0kb downstream 13732 true Chr19: 45970710-45984441 Glycine max
Glyma.19G203000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45970710-45980709 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305061 5265 Fabidae View MSA
124061797 5270 Rosid View MSA
123736545 5271 Pentapetalae View MSA
122788039 5272 Eudicot View MSA
122046768 5273 Angiosperm View MSA
121350146 5274 Embryophyte View MSA
123425854 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.237427 0.0 1.16067   Low
cufflinks 0.972319 0.0 8.17154    
cufflinks 1.02664 0.0 6.02779    
cufflinks 1.94886 0.0 11.7847    
cufflinks 1.63789 0.0 10.5671    
cufflinks 1.70022 0.0 9.38649    
cufflinks 3.12794 0.0 16.3266   High
cufflinks 0.793103 0.0 5.22348    
cufflinks 1.66073 0.0 8.67    
cufflinks 0.197        
cufflinks 0.187        
cufflinks 0.288        
cufflinks 0.366        
cufflinks 0.417       High
cufflinks 0.096        
cufflinks 0.029     Low Low
cufflinks 0.201        
cufflinks 0.635       High
cufflinks 0.203        
cufflinks 0.035     Low Low
cufflinks 0.188        
cufflinks 0.06     Low  
cufflinks 0.04     Low Low
cufflinks 0.318        
cufflinks 0.028     Low Low
cufflinks 0.188        

0 Strain