Gene : Glyma.19G203300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10769 - 40S RIBOSOMAL PROTEIN S28 Genomic Order:  2033
Name:  ? Glyma.19G203300 Secondary Identifier:  ? PAC:30511982
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G203300 0.5kb upstream 0.5kb upstream 1813 true Chr19: 45993599-45995411 Glycine max
Glyma.19G203300 0.5kb upstream 0.5kb upstream 500 false Chr19: 45994912-45995411 Glycine max
Glyma.19G203300 0.5kb downstream 0.5kb downstream 1813 true Chr19: 45993099-45994911 Glycine max
Glyma.19G203300 0.5kb downstream 0.5kb downstream 500 false Chr19: 45993099-45993598 Glycine max
Glyma.19G203300 1.0kb upstream 1.0kb upstream 2313 true Chr19: 45993599-45995911 Glycine max
Glyma.19G203300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45994912-45995911 Glycine max
Glyma.19G203300 1.0kb downstream 1.0kb downstream 2313 true Chr19: 45992599-45994911 Glycine max
Glyma.19G203300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45992599-45993598 Glycine max
Glyma.19G203300 2.0kb upstream 2.0kb upstream 3313 true Chr19: 45993599-45996911 Glycine max
Glyma.19G203300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45994912-45996911 Glycine max
Glyma.19G203300 2.0kb downstream 2.0kb downstream 3313 true Chr19: 45991599-45994911 Glycine max
Glyma.19G203300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45991599-45993598 Glycine max
Glyma.19G203300 5.0kb upstream 5.0kb upstream 6313 true Chr19: 45993599-45999911 Glycine max
Glyma.19G203300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45994912-45999911 Glycine max
Glyma.19G203300 5.0kb downstream 5.0kb downstream 6313 true Chr19: 45988599-45994911 Glycine max
Glyma.19G203300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45988599-45993598 Glycine max
Glyma.19G203300 10.0kb upstream 10.0kb upstream 11313 true Chr19: 45993599-46004911 Glycine max
Glyma.19G203300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45994912-46004911 Glycine max
Glyma.19G203300 10.0kb downstream 10.0kb downstream 11313 true Chr19: 45983599-45994911 Glycine max
Glyma.19G203300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45983599-45993598 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122309148 5265 Fabidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 159.573 0.0 438.094 High  
cufflinks 205.829 0.0 580.319 High  
cufflinks 141.143 0.0 384.774 High Low
cufflinks 110.61 0.0 297.668 High Low
cufflinks 287.365 0.0 849.7 High High
cufflinks 233.048 0.0 666.549 High  
cufflinks 319.457 0.0 954.263 High High
cufflinks 248.26 0.0 718.733 High  
cufflinks 212.447 0.0 602.269 High  
cufflinks 107.62     High  
cufflinks 70.503     High  
cufflinks 63.283     High  
cufflinks 177.251     High High
cufflinks 284.222     High High
cufflinks 60.477     High Low
cufflinks 81.525     High  
cufflinks 82.488     High  
cufflinks 78.027     High  
cufflinks 102.818     High  
cufflinks 72.619     High  
cufflinks 79.69     High  
cufflinks 73.949     High  
cufflinks 93.631     High  
cufflinks 80.617     High  
cufflinks 90.411     High  
cufflinks 84.771     High  

0 Strain