Gene : Glyma.19G203700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24007//PTHR24007:SF9 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  2037
Name:  ? Glyma.19G203700 Secondary Identifier:  ? PAC:30514065
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G203700 0.5kb upstream 0.5kb upstream 2918 true Chr19: 46010964-46013881 Glycine max
Glyma.19G203700 0.5kb upstream 0.5kb upstream 500 false Chr19: 46013382-46013881 Glycine max
Glyma.19G203700 0.5kb downstream 0.5kb downstream 2918 true Chr19: 46010464-46013381 Glycine max
Glyma.19G203700 0.5kb downstream 0.5kb downstream 500 false Chr19: 46010464-46010963 Glycine max
Glyma.19G203700 1.0kb upstream 1.0kb upstream 3418 true Chr19: 46010964-46014381 Glycine max
Glyma.19G203700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46013382-46014381 Glycine max
Glyma.19G203700 1.0kb downstream 1.0kb downstream 3418 true Chr19: 46009964-46013381 Glycine max
Glyma.19G203700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46009964-46010963 Glycine max
Glyma.19G203700 2.0kb upstream 2.0kb upstream 4418 true Chr19: 46010964-46015381 Glycine max
Glyma.19G203700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46013382-46015381 Glycine max
Glyma.19G203700 2.0kb downstream 2.0kb downstream 4418 true Chr19: 46008964-46013381 Glycine max
Glyma.19G203700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46008964-46010963 Glycine max
Glyma.19G203700 5.0kb upstream 5.0kb upstream 7418 true Chr19: 46010964-46018381 Glycine max
Glyma.19G203700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46013382-46018381 Glycine max
Glyma.19G203700 5.0kb downstream 5.0kb downstream 7418 true Chr19: 46005964-46013381 Glycine max
Glyma.19G203700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46005964-46010963 Glycine max
Glyma.19G203700 10.0kb upstream 10.0kb upstream 12418 true Chr19: 46010964-46023381 Glycine max
Glyma.19G203700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46013382-46023381 Glycine max
Glyma.19G203700 10.0kb downstream 10.0kb downstream 12418 true Chr19: 46000964-46013381 Glycine max
Glyma.19G203700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46000964-46010963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122314962 5265 Fabidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.227453 0.0 0.874832    
cufflinks 0.0126817 0.0 0.0575119 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00712122 0.0 0.034239 Low Low
cufflinks 0.150059 0.0 0.587617 Low  
cufflinks 3.16318 0.0 9.85945   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0128741 0.0 0.0582677 Low  
cufflinks 0.301703 0.0 1.14522    
cufflinks 0.018     Low  
cufflinks 2.355       High
cufflinks 0.012     Low  
cufflinks 0.764        
cufflinks 0.073        
cufflinks 0.024     Low  
cufflinks 0.008     Low  
cufflinks 0.44        
cufflinks 0.005     Low Low
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.698        
cufflinks 0.019     Low  
cufflinks 0.006     Low Low
cufflinks 6.549     High High
cufflinks 0.006     Low Low
cufflinks 0.946       High

0 Strain