Gene : Glyma.19G193300 G. max Wm82.a2.v1
Genomic Order:  1933 Name:  ? Glyma.19G193300
Secondary Identifier:  ? PAC:30512873
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G193300 0.5kb upstream 0.5kb upstream 3795 true Chr19: 45103320-45107114 Glycine max
Glyma.19G193300 0.5kb upstream 0.5kb upstream 500 false Chr19: 45103320-45103819 Glycine max
Glyma.19G193300 0.5kb downstream 0.5kb downstream 3795 true Chr19: 45103820-45107614 Glycine max
Glyma.19G193300 0.5kb downstream 0.5kb downstream 500 false Chr19: 45107115-45107614 Glycine max
Glyma.19G193300 1.0kb upstream 1.0kb upstream 4295 true Chr19: 45102820-45107114 Glycine max
Glyma.19G193300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45102820-45103819 Glycine max
Glyma.19G193300 1.0kb downstream 1.0kb downstream 4295 true Chr19: 45103820-45108114 Glycine max
Glyma.19G193300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45107115-45108114 Glycine max
Glyma.19G193300 2.0kb upstream 2.0kb upstream 5295 true Chr19: 45101820-45107114 Glycine max
Glyma.19G193300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45101820-45103819 Glycine max
Glyma.19G193300 2.0kb downstream 2.0kb downstream 5295 true Chr19: 45103820-45109114 Glycine max
Glyma.19G193300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45107115-45109114 Glycine max
Glyma.19G193300 5.0kb upstream 5.0kb upstream 8295 true Chr19: 45098820-45107114 Glycine max
Glyma.19G193300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45098820-45103819 Glycine max
Glyma.19G193300 5.0kb downstream 5.0kb downstream 8295 true Chr19: 45103820-45112114 Glycine max
Glyma.19G193300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45107115-45112114 Glycine max
Glyma.19G193300 10.0kb upstream 10.0kb upstream 13295 true Chr19: 45093820-45107114 Glycine max
Glyma.19G193300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45093820-45103819 Glycine max
Glyma.19G193300 10.0kb downstream 10.0kb downstream 13295 true Chr19: 45103820-45117114 Glycine max
Glyma.19G193300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45107115-45117114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247785 5265 Fabidae Singleton cluster - no MSA
123991482 5270 Rosid Singleton cluster - no MSA
123566430 5271 Pentapetalae Singleton cluster - no MSA
122601189 5272 Eudicot Singleton cluster - no MSA
122050586 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.22543 0.0 33.8969   High
cufflinks 2.81792 0.0 12.4784    
cufflinks 2.05757 0.0 10.1583    
cufflinks 3.97361 0.0 15.8235    
cufflinks 0.543119 0.0 3.48606    
cufflinks 0.969362 0.0 5.73843    
cufflinks 0.467945 0.0 2.26747   Low
cufflinks 15.3 0.0 52.9986   High
cufflinks 0.488413 0.0 2.34701   Low
cufflinks 0.944        
cufflinks 0.005     Low Low
cufflinks 0.701        
cufflinks 0.002     Low Low
cufflinks 0.022     Low  
cufflinks 0.026     Low  
cufflinks 1.327        
cufflinks 0.06     Low  
cufflinks 0.692        
cufflinks 0.65        
cufflinks 1.306        
cufflinks 0.008     Low Low
cufflinks 1.41       High
cufflinks 0.76        
cufflinks 0.006     Low Low
cufflinks 1.385       High
cufflinks 0.016     Low  

0 Strain