Gene : Glyma.19G193400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22952:SF208 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  1934
Name:  ? Glyma.19G193400 Secondary Identifier:  ? PAC:30514320
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G193400 0.5kb upstream 0.5kb upstream 5589 true Chr19: 45110424-45116012 Glycine max
Glyma.19G193400 0.5kb upstream 0.5kb upstream 500 false Chr19: 45110424-45110923 Glycine max
Glyma.19G193400 0.5kb downstream 0.5kb downstream 5589 true Chr19: 45110924-45116512 Glycine max
Glyma.19G193400 0.5kb downstream 0.5kb downstream 500 false Chr19: 45116013-45116512 Glycine max
Glyma.19G193400 1.0kb upstream 1.0kb upstream 6089 true Chr19: 45109924-45116012 Glycine max
Glyma.19G193400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45109924-45110923 Glycine max
Glyma.19G193400 1.0kb downstream 1.0kb downstream 6089 true Chr19: 45110924-45117012 Glycine max
Glyma.19G193400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45116013-45117012 Glycine max
Glyma.19G193400 2.0kb upstream 2.0kb upstream 7089 true Chr19: 45108924-45116012 Glycine max
Glyma.19G193400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45108924-45110923 Glycine max
Glyma.19G193400 2.0kb downstream 2.0kb downstream 7089 true Chr19: 45110924-45118012 Glycine max
Glyma.19G193400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45116013-45118012 Glycine max
Glyma.19G193400 5.0kb upstream 5.0kb upstream 10089 true Chr19: 45105924-45116012 Glycine max
Glyma.19G193400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45105924-45110923 Glycine max
Glyma.19G193400 5.0kb downstream 5.0kb downstream 10089 true Chr19: 45110924-45121012 Glycine max
Glyma.19G193400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45116013-45121012 Glycine max
Glyma.19G193400 10.0kb upstream 10.0kb upstream 15089 true Chr19: 45100924-45116012 Glycine max
Glyma.19G193400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45100924-45110923 Glycine max
Glyma.19G193400 10.0kb downstream 10.0kb downstream 15089 true Chr19: 45110924-45126012 Glycine max
Glyma.19G193400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45116013-45126012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303744 5265 Fabidae View MSA
124060853 5270 Rosid View MSA
123741082 5271 Pentapetalae View MSA
122785822 5272 Eudicot View MSA
122047006 5273 Angiosperm View MSA
121351169 5274 Embryophyte View MSA
123425858 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.708661 0.0 2.54144    
cufflinks 1.37435 0.0 4.64446    
cufflinks 0.285544 0.0 1.0755   Low
cufflinks 0.879489 0.0 3.09709    
cufflinks 1.56175 0.0 5.18978    
cufflinks 1.23373 0.0 4.2205    
cufflinks 2.83696 0.0 8.70153   High
cufflinks 0.411998 0.0 1.52412    
cufflinks 0.314048 0.0 1.17795   Low
cufflinks 0.21        
cufflinks 0.351        
cufflinks 0.445        
cufflinks 0.708        
cufflinks 1.007        
cufflinks 0.618        
cufflinks 0.811        
cufflinks 0.02     Low Low
cufflinks 0.4        
cufflinks 0.857        
cufflinks 0.867        
cufflinks 0.234        
cufflinks 0.636        
cufflinks 0.363        
cufflinks 0.19        
cufflinks 1.146       High
cufflinks 0.177        

0 Strain