Gene : Glyma.19G194100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33601:SF7 - PROTEIN LITTLE ZIPPER 3 Genomic Order:  1941
Name:  ? Glyma.19G194100 Secondary Identifier:  ? PAC:30511220
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G194100 0.5kb upstream 0.5kb upstream 2450 true Chr19: 45162428-45164877 Glycine max
Glyma.19G194100 0.5kb upstream 0.5kb upstream 500 false Chr19: 45162428-45162927 Glycine max
Glyma.19G194100 0.5kb downstream 0.5kb downstream 2450 true Chr19: 45162928-45165377 Glycine max
Glyma.19G194100 0.5kb downstream 0.5kb downstream 500 false Chr19: 45164878-45165377 Glycine max
Glyma.19G194100 1.0kb upstream 1.0kb upstream 2950 true Chr19: 45161928-45164877 Glycine max
Glyma.19G194100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45161928-45162927 Glycine max
Glyma.19G194100 1.0kb downstream 1.0kb downstream 2950 true Chr19: 45162928-45165877 Glycine max
Glyma.19G194100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45164878-45165877 Glycine max
Glyma.19G194100 2.0kb upstream 2.0kb upstream 3950 true Chr19: 45160928-45164877 Glycine max
Glyma.19G194100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45160928-45162927 Glycine max
Glyma.19G194100 2.0kb downstream 2.0kb downstream 3950 true Chr19: 45162928-45166877 Glycine max
Glyma.19G194100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45164878-45166877 Glycine max
Glyma.19G194100 5.0kb upstream 5.0kb upstream 6950 true Chr19: 45157928-45164877 Glycine max
Glyma.19G194100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45157928-45162927 Glycine max
Glyma.19G194100 5.0kb downstream 5.0kb downstream 6950 true Chr19: 45162928-45169877 Glycine max
Glyma.19G194100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45164878-45169877 Glycine max
Glyma.19G194100 10.0kb upstream 10.0kb upstream 11950 true Chr19: 45152928-45164877 Glycine max
Glyma.19G194100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45152928-45162927 Glycine max
Glyma.19G194100 10.0kb downstream 10.0kb downstream 11950 true Chr19: 45162928-45174877 Glycine max
Glyma.19G194100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45164878-45174877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303227 5265 Fabidae View MSA
124071909 5270 Rosid View MSA
123751498 5271 Pentapetalae View MSA
122790850 5272 Eudicot View MSA
122046003 5273 Angiosperm View MSA
121310535 5274 Embryophyte View MSA
123347994 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.60826 0.0 5.86033   High
cufflinks 0.174538 0.0 0.700115 Low Low
cufflinks 1.27492 0.0 4.70439    
cufflinks 0.691607 0.0 2.62994    
cufflinks 0.52238 0.0 2.01045    
cufflinks 1.74494 0.0 6.33908   High
cufflinks 0.710807 0.0 2.69392    
cufflinks 0.703908 0.0 2.67193    
cufflinks 0.795        
cufflinks 0.197       Low
cufflinks 0.685        
cufflinks 0.741        
cufflinks 0.308        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.51        
cufflinks 3.946       High
cufflinks 0.897        
cufflinks 0.285        
cufflinks 0.564        
cufflinks 0.314        
cufflinks 0.54        
cufflinks 1.078        
cufflinks 0.166       Low
cufflinks 0.53        
cufflinks 0.293        

0 Strain