Gene : Glyma.19G195100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10553//PTHR10553:SF9 - SMALL NUCLEAR RIBONUCLEOPROTEIN Genomic Order:  1951
Name:  ? Glyma.19G195100 Secondary Identifier:  ? PAC:30514473
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G195100 0.5kb upstream 0.5kb upstream 1905 true Chr19: 45246104-45248008 Glycine max
Glyma.19G195100 0.5kb upstream 0.5kb upstream 500 false Chr19: 45247509-45248008 Glycine max
Glyma.19G195100 0.5kb downstream 0.5kb downstream 1905 true Chr19: 45245604-45247508 Glycine max
Glyma.19G195100 0.5kb downstream 0.5kb downstream 500 false Chr19: 45245604-45246103 Glycine max
Glyma.19G195100 1.0kb upstream 1.0kb upstream 2405 true Chr19: 45246104-45248508 Glycine max
Glyma.19G195100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45247509-45248508 Glycine max
Glyma.19G195100 1.0kb downstream 1.0kb downstream 2405 true Chr19: 45245104-45247508 Glycine max
Glyma.19G195100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45245104-45246103 Glycine max
Glyma.19G195100 2.0kb upstream 2.0kb upstream 3405 true Chr19: 45246104-45249508 Glycine max
Glyma.19G195100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45247509-45249508 Glycine max
Glyma.19G195100 2.0kb downstream 2.0kb downstream 3405 true Chr19: 45244104-45247508 Glycine max
Glyma.19G195100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45244104-45246103 Glycine max
Glyma.19G195100 5.0kb upstream 5.0kb upstream 6405 true Chr19: 45246104-45252508 Glycine max
Glyma.19G195100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45247509-45252508 Glycine max
Glyma.19G195100 5.0kb downstream 5.0kb downstream 6405 true Chr19: 45241104-45247508 Glycine max
Glyma.19G195100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45241104-45246103 Glycine max
Glyma.19G195100 10.0kb upstream 10.0kb upstream 11405 true Chr19: 45246104-45257508 Glycine max
Glyma.19G195100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45247509-45257508 Glycine max
Glyma.19G195100 10.0kb downstream 10.0kb downstream 11405 true Chr19: 45236104-45247508 Glycine max
Glyma.19G195100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45236104-45246103 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310091 5265 Fabidae View MSA
124063734 5270 Rosid View MSA
123743762 5271 Pentapetalae View MSA
122792328 5272 Eudicot View MSA
122043124 5273 Angiosperm View MSA
121347194 5274 Embryophyte View MSA
123426460 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.6689 0.0 161.931 High  
cufflinks 96.5329 0.0 262.092 High High
cufflinks 54.9446 0.0 146.593 High Low
cufflinks 61.0623 0.0 163.028 High  
cufflinks 82.4477 0.0 221.9 High  
cufflinks 95.7683 0.0 259.936 High High
cufflinks 78.2798 0.0 210.15 High  
cufflinks 73.3968 0.0 196.739 High  
cufflinks 61.1615 0.0 163.294 High  
cufflinks 29.561     High  
cufflinks 8.559     High Low
cufflinks 29.476     High  
cufflinks 41.947     High High
cufflinks 52.995     High High
cufflinks 6.391     High Low
cufflinks 27.712     High  
cufflinks 18.102     High  
cufflinks 33.207     High  
cufflinks 40.755     High High
cufflinks 23.054     High  
cufflinks 12.112     High Low
cufflinks 26.753     High  
cufflinks 28.315     High  
cufflinks 12.544     High Low
cufflinks 29.122     High  
cufflinks 17.612     High  

0 Strain