Gene : Glyma.19G195500 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion Genomic Order:  1955
Name:  ? Glyma.19G195500 Secondary Identifier:  ? PAC:30513060
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G195500 0.5kb upstream 0.5kb upstream 1721 true Chr19: 45269604-45271324 Glycine max
Glyma.19G195500 0.5kb upstream 0.5kb upstream 500 false Chr19: 45270825-45271324 Glycine max
Glyma.19G195500 0.5kb downstream 0.5kb downstream 1721 true Chr19: 45269104-45270824 Glycine max
Glyma.19G195500 0.5kb downstream 0.5kb downstream 500 false Chr19: 45269104-45269603 Glycine max
Glyma.19G195500 1.0kb upstream 1.0kb upstream 2221 true Chr19: 45269604-45271824 Glycine max
Glyma.19G195500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45270825-45271824 Glycine max
Glyma.19G195500 1.0kb downstream 1.0kb downstream 2221 true Chr19: 45268604-45270824 Glycine max
Glyma.19G195500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45268604-45269603 Glycine max
Glyma.19G195500 2.0kb upstream 2.0kb upstream 3221 true Chr19: 45269604-45272824 Glycine max
Glyma.19G195500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45270825-45272824 Glycine max
Glyma.19G195500 2.0kb downstream 2.0kb downstream 3221 true Chr19: 45267604-45270824 Glycine max
Glyma.19G195500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45267604-45269603 Glycine max
Glyma.19G195500 5.0kb upstream 5.0kb upstream 6221 true Chr19: 45269604-45275824 Glycine max
Glyma.19G195500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45270825-45275824 Glycine max
Glyma.19G195500 5.0kb downstream 5.0kb downstream 6221 true Chr19: 45264604-45270824 Glycine max
Glyma.19G195500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45264604-45269603 Glycine max
Glyma.19G195500 10.0kb upstream 10.0kb upstream 11221 true Chr19: 45269604-45280824 Glycine max
Glyma.19G195500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45270825-45280824 Glycine max
Glyma.19G195500 10.0kb downstream 10.0kb downstream 11221 true Chr19: 45259604-45270824 Glycine max
Glyma.19G195500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45259604-45269603 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314502 5265 Fabidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 177.337 0.0 706.647 High  
cufflinks 247.45 0.0 918.464 High  
cufflinks 87.3113 0.0 296.661 High Low
cufflinks 144.206 0.0 543.716 High  
cufflinks 341.387 0.0 1485.55 High High
cufflinks 309.88 0.0 1264.36 High  
cufflinks 285.386 0.0 1137.97 High  
cufflinks 259.792 0.0 1009.44 High  
cufflinks 238.211 0.0 882.274 High  
cufflinks 62.162     High  
cufflinks 12.836     High Low
cufflinks 36.065     High  
cufflinks 108.376     High High
cufflinks 168.102     High High
cufflinks 19.962     High Low
cufflinks 50.788     High  
cufflinks 31.714     High  
cufflinks 40.666     High  
cufflinks 59.221     High  
cufflinks 33.357     High  
cufflinks 24.651     High  
cufflinks 36.964     High  
cufflinks 64.17     High  
cufflinks 16.925     High Low
cufflinks 45.939     High  
cufflinks 30.873     High  

0 Strain