Gene : Glyma.19G196700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11010//PTHR11010:SF48 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED Genomic Order:  1967
Name:  ? Glyma.19G196700 Secondary Identifier:  ? PAC:30514252
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G196700 0.5kb upstream 0.5kb upstream 7634 true Chr19: 45383611-45391244 Glycine max
Glyma.19G196700 0.5kb upstream 0.5kb upstream 500 false Chr19: 45390745-45391244 Glycine max
Glyma.19G196700 0.5kb downstream 0.5kb downstream 7634 true Chr19: 45383111-45390744 Glycine max
Glyma.19G196700 0.5kb downstream 0.5kb downstream 500 false Chr19: 45383111-45383610 Glycine max
Glyma.19G196700 1.0kb upstream 1.0kb upstream 8134 true Chr19: 45383611-45391744 Glycine max
Glyma.19G196700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45390745-45391744 Glycine max
Glyma.19G196700 1.0kb downstream 1.0kb downstream 8134 true Chr19: 45382611-45390744 Glycine max
Glyma.19G196700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45382611-45383610 Glycine max
Glyma.19G196700 2.0kb upstream 2.0kb upstream 9134 true Chr19: 45383611-45392744 Glycine max
Glyma.19G196700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45390745-45392744 Glycine max
Glyma.19G196700 2.0kb downstream 2.0kb downstream 9134 true Chr19: 45381611-45390744 Glycine max
Glyma.19G196700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45381611-45383610 Glycine max
Glyma.19G196700 5.0kb upstream 5.0kb upstream 12134 true Chr19: 45383611-45395744 Glycine max
Glyma.19G196700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45390745-45395744 Glycine max
Glyma.19G196700 5.0kb downstream 5.0kb downstream 12134 true Chr19: 45378611-45390744 Glycine max
Glyma.19G196700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45378611-45383610 Glycine max
Glyma.19G196700 10.0kb upstream 10.0kb upstream 17134 true Chr19: 45383611-45400744 Glycine max
Glyma.19G196700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45390745-45400744 Glycine max
Glyma.19G196700 10.0kb downstream 10.0kb downstream 17134 true Chr19: 45373611-45390744 Glycine max
Glyma.19G196700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45373611-45383610 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311997 5265 Fabidae View MSA
124070997 5270 Rosid View MSA
123753394 5271 Pentapetalae View MSA
122793921 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.23074 0.0 37.8754    
cufflinks 6.59845 0.0 31.832    
cufflinks 5.5114 0.0 28.5156    
cufflinks 41.3641 0.0 211.812 High High
cufflinks 5.93188 0.0 29.1153    
cufflinks 11.9054 0.0 56.3276    
cufflinks 11.6103 0.0 44.0876    
cufflinks 4.1636 0.0 24.135    
cufflinks 5.15657 0.0 24.3658    
cufflinks 2.073       High
cufflinks 0.038     Low Low
cufflinks 0.651        
cufflinks 1.3        
cufflinks 1.121        
cufflinks 0.116        
cufflinks 0.889        
cufflinks 0.112        
cufflinks 0.969        
cufflinks 0.583        
cufflinks 1.317        
cufflinks 0.074       Low
cufflinks 1.039        
cufflinks 0.597        
cufflinks 0.044     Low Low
cufflinks 1.013        
cufflinks 0.148        

0 Strain