Gene : Glyma.19G197800 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR33057:SF17 - GB Genomic Order:  1978
Name:  ? Glyma.19G197800 Secondary Identifier:  ? PAC:30512266
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G197800 0.5kb upstream 0.5kb upstream 1076 true Chr19: 45516594-45517669 Glycine max
Glyma.19G197800 0.5kb upstream 0.5kb upstream 500 false Chr19: 45517170-45517669 Glycine max
Glyma.19G197800 0.5kb downstream 0.5kb downstream 1076 true Chr19: 45516094-45517169 Glycine max
Glyma.19G197800 0.5kb downstream 0.5kb downstream 500 false Chr19: 45516094-45516593 Glycine max
Glyma.19G197800 1.0kb upstream 1.0kb upstream 1576 true Chr19: 45516594-45518169 Glycine max
Glyma.19G197800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45517170-45518169 Glycine max
Glyma.19G197800 1.0kb downstream 1.0kb downstream 1576 true Chr19: 45515594-45517169 Glycine max
Glyma.19G197800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45515594-45516593 Glycine max
Glyma.19G197800 2.0kb upstream 2.0kb upstream 2576 true Chr19: 45516594-45519169 Glycine max
Glyma.19G197800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45517170-45519169 Glycine max
Glyma.19G197800 2.0kb downstream 2.0kb downstream 2576 true Chr19: 45514594-45517169 Glycine max
Glyma.19G197800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45514594-45516593 Glycine max
Glyma.19G197800 5.0kb upstream 5.0kb upstream 5576 true Chr19: 45516594-45522169 Glycine max
Glyma.19G197800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45517170-45522169 Glycine max
Glyma.19G197800 5.0kb downstream 5.0kb downstream 5576 true Chr19: 45511594-45517169 Glycine max
Glyma.19G197800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45511594-45516593 Glycine max
Glyma.19G197800 10.0kb upstream 10.0kb upstream 10576 true Chr19: 45516594-45527169 Glycine max
Glyma.19G197800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45517170-45527169 Glycine max
Glyma.19G197800 10.0kb downstream 10.0kb downstream 10576 true Chr19: 45506594-45517169 Glycine max
Glyma.19G197800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45506594-45516593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36901 0.0 8.59801   High
cufflinks 1.41823 0.0 5.29585   High
cufflinks 0.465035 0.0 1.82263    
cufflinks 0.756474 0.0 2.90253    
cufflinks 0.556697 0.0 2.16234    
cufflinks 0.711448 0.0 2.7381    
cufflinks 0.568059 0.0 2.2036    
cufflinks 0.361375 0.0 1.42599   Low
cufflinks 0.707309 0.0 2.72059    
cufflinks 0.567       Low
cufflinks 2.584        
cufflinks 1.028       Low
cufflinks 4.442        
cufflinks 2.632        
cufflinks 1.935        
cufflinks 8.141     High High
cufflinks 0.604       Low
cufflinks 0.979       Low
cufflinks 2.044        
cufflinks 11.219     High High
cufflinks 3.311        
cufflinks 6.457        
cufflinks 5.215        
cufflinks 2.887        
cufflinks 8.615     High High
cufflinks 3.394        

0 Strain