Gene : Glyma.19G200100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11076:SF35 - PROTEIN CHROMOSOME TRANSMISSION FIDELITY 7 Genomic Order:  2001
Name:  ? Glyma.19G200100 Secondary Identifier:  ? PAC:30511930
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G200100 0.5kb upstream 0.5kb upstream 3287 true Chr19: 45710753-45714039 Glycine max
Glyma.19G200100 0.5kb upstream 0.5kb upstream 500 false Chr19: 45710753-45711252 Glycine max
Glyma.19G200100 0.5kb downstream 0.5kb downstream 3287 true Chr19: 45711253-45714539 Glycine max
Glyma.19G200100 0.5kb downstream 0.5kb downstream 500 false Chr19: 45714040-45714539 Glycine max
Glyma.19G200100 1.0kb upstream 1.0kb upstream 3787 true Chr19: 45710253-45714039 Glycine max
Glyma.19G200100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45710253-45711252 Glycine max
Glyma.19G200100 1.0kb downstream 1.0kb downstream 3787 true Chr19: 45711253-45715039 Glycine max
Glyma.19G200100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45714040-45715039 Glycine max
Glyma.19G200100 2.0kb upstream 2.0kb upstream 4787 true Chr19: 45709253-45714039 Glycine max
Glyma.19G200100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45709253-45711252 Glycine max
Glyma.19G200100 2.0kb downstream 2.0kb downstream 4787 true Chr19: 45711253-45716039 Glycine max
Glyma.19G200100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45714040-45716039 Glycine max
Glyma.19G200100 5.0kb upstream 5.0kb upstream 7787 true Chr19: 45706253-45714039 Glycine max
Glyma.19G200100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45706253-45711252 Glycine max
Glyma.19G200100 5.0kb downstream 5.0kb downstream 7787 true Chr19: 45711253-45719039 Glycine max
Glyma.19G200100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45714040-45719039 Glycine max
Glyma.19G200100 10.0kb upstream 10.0kb upstream 12787 true Chr19: 45701253-45714039 Glycine max
Glyma.19G200100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45701253-45711252 Glycine max
Glyma.19G200100 10.0kb downstream 10.0kb downstream 12787 true Chr19: 45711253-45724039 Glycine max
Glyma.19G200100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45714040-45724039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303076 5265 Fabidae View MSA
124063061 5270 Rosid View MSA
123744471 5271 Pentapetalae View MSA
122791353 5272 Eudicot View MSA
122046028 5273 Angiosperm View MSA
121348225 5274 Embryophyte View MSA
123425872 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.07469 0.0 24.2169    
cufflinks 6.9071 0.0 29.7538    
cufflinks 4.16351 0.0 21.1621    
cufflinks 4.87094 0.0 23.2282    
cufflinks 6.64189 0.0 29.7011    
cufflinks 13.8316 0.0 59.1061   High
cufflinks 3.55244 0.0 19.3193   Low
cufflinks 7.46955 0.0 31.9337    
cufflinks 8.79268 0.0 35.696    
cufflinks 0.624        
cufflinks 0.656        
cufflinks 0.57        
cufflinks 0.692        
cufflinks 0.662        
cufflinks 0.255       Low
cufflinks 0.874        
cufflinks 0.75        
cufflinks 0.851        
cufflinks 0.795        
cufflinks 0.824        
cufflinks 0.5       Low
cufflinks 0.956        
cufflinks 0.987       High
cufflinks 0.879        
cufflinks 0.809        
cufflinks 0.773        

0 Strain