Gene : Glyma.19G188400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31614:SF13 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  1884
Name:  ? Glyma.19G188400 Secondary Identifier:  ? PAC:30513322
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G188400 0.5kb upstream 0.5kb upstream 1414 true Chr19: 44657727-44659140 Glycine max
Glyma.19G188400 0.5kb upstream 0.5kb upstream 500 false Chr19: 44658641-44659140 Glycine max
Glyma.19G188400 0.5kb downstream 0.5kb downstream 1414 true Chr19: 44657227-44658640 Glycine max
Glyma.19G188400 0.5kb downstream 0.5kb downstream 500 false Chr19: 44657227-44657726 Glycine max
Glyma.19G188400 1.0kb upstream 1.0kb upstream 1914 true Chr19: 44657727-44659640 Glycine max
Glyma.19G188400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44658641-44659640 Glycine max
Glyma.19G188400 1.0kb downstream 1.0kb downstream 1914 true Chr19: 44656727-44658640 Glycine max
Glyma.19G188400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44656727-44657726 Glycine max
Glyma.19G188400 2.0kb upstream 2.0kb upstream 2914 true Chr19: 44657727-44660640 Glycine max
Glyma.19G188400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44658641-44660640 Glycine max
Glyma.19G188400 2.0kb downstream 2.0kb downstream 2914 true Chr19: 44655727-44658640 Glycine max
Glyma.19G188400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44655727-44657726 Glycine max
Glyma.19G188400 5.0kb upstream 5.0kb upstream 5914 true Chr19: 44657727-44663640 Glycine max
Glyma.19G188400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44658641-44663640 Glycine max
Glyma.19G188400 5.0kb downstream 5.0kb downstream 5914 true Chr19: 44652727-44658640 Glycine max
Glyma.19G188400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44652727-44657726 Glycine max
Glyma.19G188400 10.0kb upstream 10.0kb upstream 10914 true Chr19: 44657727-44668640 Glycine max
Glyma.19G188400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44658641-44668640 Glycine max
Glyma.19G188400 10.0kb downstream 10.0kb downstream 10914 true Chr19: 44647727-44658640 Glycine max
Glyma.19G188400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44647727-44657726 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304677 5265 Fabidae View MSA
124072733 5270 Rosid View MSA
123745578 5271 Pentapetalae View MSA
122796386 5272 Eudicot View MSA
122047345 5273 Angiosperm View MSA
121310733 5274 Embryophyte View MSA
123348146 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0649806 0.0 0.276914 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0781569 0.0 0.327173 Low  
cufflinks 0.0520385 0.0 0.225409 Low  
cufflinks 12.0938 0.0 35.3656    
cufflinks 1085.8 0.0 5008.65 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.1969 0.0 35.6047    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.214        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 39.755     High High
cufflinks 8.795     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.569        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.143        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.095        

0 Strain