Gene : Glyma.19G190100 G. max Wm82.a2.v1

Defline:  (1 of 9) PTHR11817//PTHR11817:SF33 - PYRUVATE KINASE Genomic Order:  1901
Name:  ? Glyma.19G190100 Secondary Identifier:  ? PAC:30513107

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G190100 0.5kb upstream 0.5kb upstream 7682 true Chr19: 44772176-44779857 Glycine max
Glyma.19G190100 0.5kb upstream 0.5kb upstream 500 false Chr19: 44779358-44779857 Glycine max
Glyma.19G190100 0.5kb downstream 0.5kb downstream 7682 true Chr19: 44771676-44779357 Glycine max
Glyma.19G190100 0.5kb downstream 0.5kb downstream 500 false Chr19: 44771676-44772175 Glycine max
Glyma.19G190100 1.0kb upstream 1.0kb upstream 8182 true Chr19: 44772176-44780357 Glycine max
Glyma.19G190100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44779358-44780357 Glycine max
Glyma.19G190100 1.0kb downstream 1.0kb downstream 8182 true Chr19: 44771176-44779357 Glycine max
Glyma.19G190100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44771176-44772175 Glycine max
Glyma.19G190100 2.0kb upstream 2.0kb upstream 9182 true Chr19: 44772176-44781357 Glycine max
Glyma.19G190100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44779358-44781357 Glycine max
Glyma.19G190100 2.0kb downstream 2.0kb downstream 9182 true Chr19: 44770176-44779357 Glycine max
Glyma.19G190100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44770176-44772175 Glycine max
Glyma.19G190100 5.0kb upstream 5.0kb upstream 12182 true Chr19: 44772176-44784357 Glycine max
Glyma.19G190100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44779358-44784357 Glycine max
Glyma.19G190100 5.0kb downstream 5.0kb downstream 12182 true Chr19: 44767176-44779357 Glycine max
Glyma.19G190100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44767176-44772175 Glycine max
Glyma.19G190100 10.0kb upstream 10.0kb upstream 17182 true Chr19: 44772176-44789357 Glycine max
Glyma.19G190100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44779358-44789357 Glycine max
Glyma.19G190100 10.0kb downstream 10.0kb downstream 17182 true Chr19: 44762176-44779357 Glycine max
Glyma.19G190100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44762176-44772175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311150 5265 Fabidae View MSA
124072405 5270 Rosid View MSA
123746399 5271 Pentapetalae View MSA
122796515 5272 Eudicot View MSA
122046004 5273 Angiosperm View MSA
121344818 5274 Embryophyte View MSA
123427832 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.36621 0.0 6.94891   Low
cufflinks 3.57165 0.0 13.318    
cufflinks 6.69487 0.0 24.5929    
cufflinks 9.5883 0.0 33.4766    
cufflinks 4.20898 0.0 17.7448    
cufflinks 2.63643 0.0 8.17944    
cufflinks 28.9128 0.0 103.839 High High
cufflinks 5.70977 0.0 21.996    
cufflinks 3.87435 0.0 16.2882    
cufflinks 0.776        
cufflinks 2.249       High
cufflinks 1.204        
cufflinks 0.836        
cufflinks 1.33        
cufflinks 2.405       High
cufflinks 0.172       Low
cufflinks 0.445        
cufflinks 2.408       High
cufflinks 0.673        
cufflinks 0.125       Low
cufflinks 3.182       High
cufflinks 0.151       Low
cufflinks 0.346        
cufflinks 1.426        
cufflinks 0.142       Low
cufflinks 1.457        

0 Strain