Gene : Glyma.19G191800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR15921 - PRE-MRNA CLEAVAGE COMPLEX II Genomic Order:  1918
Name:  ? Glyma.19G191800 Secondary Identifier:  ? PAC:30511513
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G191800 0.5kb upstream 0.5kb upstream 7578 true Chr19: 44903624-44911201 Glycine max
Glyma.19G191800 0.5kb upstream 0.5kb upstream 500 false Chr19: 44903624-44904123 Glycine max
Glyma.19G191800 0.5kb downstream 0.5kb downstream 7578 true Chr19: 44904124-44911701 Glycine max
Glyma.19G191800 0.5kb downstream 0.5kb downstream 500 false Chr19: 44911202-44911701 Glycine max
Glyma.19G191800 1.0kb upstream 1.0kb upstream 8078 true Chr19: 44903124-44911201 Glycine max
Glyma.19G191800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44903124-44904123 Glycine max
Glyma.19G191800 1.0kb downstream 1.0kb downstream 8078 true Chr19: 44904124-44912201 Glycine max
Glyma.19G191800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44911202-44912201 Glycine max
Glyma.19G191800 2.0kb upstream 2.0kb upstream 9078 true Chr19: 44902124-44911201 Glycine max
Glyma.19G191800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44902124-44904123 Glycine max
Glyma.19G191800 2.0kb downstream 2.0kb downstream 9078 true Chr19: 44904124-44913201 Glycine max
Glyma.19G191800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44911202-44913201 Glycine max
Glyma.19G191800 5.0kb upstream 5.0kb upstream 12078 true Chr19: 44899124-44911201 Glycine max
Glyma.19G191800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44899124-44904123 Glycine max
Glyma.19G191800 5.0kb downstream 5.0kb downstream 12078 true Chr19: 44904124-44916201 Glycine max
Glyma.19G191800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44911202-44916201 Glycine max
Glyma.19G191800 10.0kb upstream 10.0kb upstream 17078 true Chr19: 44894124-44911201 Glycine max
Glyma.19G191800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44894124-44904123 Glycine max
Glyma.19G191800 10.0kb downstream 10.0kb downstream 17078 true Chr19: 44904124-44921201 Glycine max
Glyma.19G191800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44911202-44921201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300860 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.03869 0.0 23.3564   High
cufflinks 5.32169 0.0 22.8108    
cufflinks 5.69277 0.0 22.4444    
cufflinks 4.93022 0.0 19.894    
cufflinks 4.60041 0.0 18.4223    
cufflinks 4.02664 0.0 14.6657   Low
cufflinks 6.21077 0.0 24.0221   High
cufflinks 3.65034 0.0 13.5409   Low
cufflinks 4.70542 0.0 18.7508    
cufflinks 0.497       Low
cufflinks 1.063       High
cufflinks 0.769        
cufflinks 0.67        
cufflinks 0.679        
cufflinks 0.835        
cufflinks 0.8        
cufflinks 0.599       Low
cufflinks 0.782        
cufflinks 0.79        
cufflinks 0.819        
cufflinks 0.908        
cufflinks 0.836        
cufflinks 0.686        
cufflinks 1.153       High
cufflinks 0.746        
cufflinks 0.797        

0 Strain