Gene : Glyma.19G191900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR15921 - PRE-MRNA CLEAVAGE COMPLEX II Genomic Order:  1919
Name:  ? Glyma.19G191900 Secondary Identifier:  ? PAC:30511875
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G191900 0.5kb upstream 0.5kb upstream 7228 true Chr19: 44916208-44923435 Glycine max
Glyma.19G191900 0.5kb upstream 0.5kb upstream 500 false Chr19: 44916208-44916707 Glycine max
Glyma.19G191900 0.5kb downstream 0.5kb downstream 7228 true Chr19: 44916708-44923935 Glycine max
Glyma.19G191900 0.5kb downstream 0.5kb downstream 500 false Chr19: 44923436-44923935 Glycine max
Glyma.19G191900 1.0kb upstream 1.0kb upstream 7728 true Chr19: 44915708-44923435 Glycine max
Glyma.19G191900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44915708-44916707 Glycine max
Glyma.19G191900 1.0kb downstream 1.0kb downstream 7728 true Chr19: 44916708-44924435 Glycine max
Glyma.19G191900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44923436-44924435 Glycine max
Glyma.19G191900 2.0kb upstream 2.0kb upstream 8728 true Chr19: 44914708-44923435 Glycine max
Glyma.19G191900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44914708-44916707 Glycine max
Glyma.19G191900 2.0kb downstream 2.0kb downstream 8728 true Chr19: 44916708-44925435 Glycine max
Glyma.19G191900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44923436-44925435 Glycine max
Glyma.19G191900 5.0kb upstream 5.0kb upstream 11728 true Chr19: 44911708-44923435 Glycine max
Glyma.19G191900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44911708-44916707 Glycine max
Glyma.19G191900 5.0kb downstream 5.0kb downstream 11728 true Chr19: 44916708-44928435 Glycine max
Glyma.19G191900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44923436-44928435 Glycine max
Glyma.19G191900 10.0kb upstream 10.0kb upstream 16728 true Chr19: 44906708-44923435 Glycine max
Glyma.19G191900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44906708-44916707 Glycine max
Glyma.19G191900 10.0kb downstream 10.0kb downstream 16728 true Chr19: 44916708-44933435 Glycine max
Glyma.19G191900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44923436-44933435 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300860 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.55865 0.0 13.0822    
cufflinks 3.91017 0.0 17.1781    
cufflinks 4.15931 0.0 16.8767    
cufflinks 4.34598 0.0 17.1819    
cufflinks 3.39853 0.0 14.3113    
cufflinks 2.1432 0.0 8.95747   Low
cufflinks 5.57129 0.0 21.3824   High
cufflinks 2.82917 0.0 10.9542    
cufflinks 3.05741 0.0 11.7625    
cufflinks 0.481        
cufflinks 0.563        
cufflinks 0.826       High
cufflinks 0.545        
cufflinks 0.633        
cufflinks 0.496        
cufflinks 0.632        
cufflinks 0.37       Low
cufflinks 0.901       High
cufflinks 0.886       High
cufflinks 0.613        
cufflinks 0.512        
cufflinks 0.634        
cufflinks 0.559        
cufflinks 0.614        
cufflinks 0.557        
cufflinks 0.38       Low

0 Strain