Gene : Glyma.19G192300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21654:SF5 - TRIHELIX TRANSCRIPTION FACTOR PTL Genomic Order:  1923
Name:  ? Glyma.19G192300 Secondary Identifier:  ? PAC:30511525
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G192300 0.5kb upstream 0.5kb upstream 4005 true Chr19: 44955552-44959556 Glycine max
Glyma.19G192300 0.5kb upstream 0.5kb upstream 500 false Chr19: 44959057-44959556 Glycine max
Glyma.19G192300 0.5kb downstream 0.5kb downstream 4005 true Chr19: 44955052-44959056 Glycine max
Glyma.19G192300 0.5kb downstream 0.5kb downstream 500 false Chr19: 44955052-44955551 Glycine max
Glyma.19G192300 1.0kb upstream 1.0kb upstream 4505 true Chr19: 44955552-44960056 Glycine max
Glyma.19G192300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44959057-44960056 Glycine max
Glyma.19G192300 1.0kb downstream 1.0kb downstream 4505 true Chr19: 44954552-44959056 Glycine max
Glyma.19G192300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44954552-44955551 Glycine max
Glyma.19G192300 2.0kb upstream 2.0kb upstream 5505 true Chr19: 44955552-44961056 Glycine max
Glyma.19G192300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44959057-44961056 Glycine max
Glyma.19G192300 2.0kb downstream 2.0kb downstream 5505 true Chr19: 44953552-44959056 Glycine max
Glyma.19G192300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44953552-44955551 Glycine max
Glyma.19G192300 5.0kb upstream 5.0kb upstream 8505 true Chr19: 44955552-44964056 Glycine max
Glyma.19G192300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44959057-44964056 Glycine max
Glyma.19G192300 5.0kb downstream 5.0kb downstream 8505 true Chr19: 44950552-44959056 Glycine max
Glyma.19G192300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44950552-44955551 Glycine max
Glyma.19G192300 10.0kb upstream 10.0kb upstream 13505 true Chr19: 44955552-44969056 Glycine max
Glyma.19G192300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44959057-44969056 Glycine max
Glyma.19G192300 10.0kb downstream 10.0kb downstream 13505 true Chr19: 44945552-44959056 Glycine max
Glyma.19G192300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44945552-44955551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311371 5265 Fabidae View MSA
124071653 5270 Rosid View MSA
123751862 5271 Pentapetalae View MSA
122786216 5272 Eudicot View MSA
122049868 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138987 0.0 0.68207 Low Low
cufflinks 2.35818 0.0 8.7294    
cufflinks 1.11541 0.0 5.25726    
cufflinks 3.96962 0.0 14.8526    
cufflinks 2.44209 0.0 8.86152    
cufflinks 3.20068 0.0 12.5102    
cufflinks 2.4739 0.0 10.4236    
cufflinks 9.08803 0.0 30.8955   High
cufflinks 2.15527 0.0 8.04669    
cufflinks 3.659       High
cufflinks 0.091       Low
cufflinks 1.305        
cufflinks 0.543        
cufflinks 0.831        
cufflinks 0.875        
cufflinks 0.566        
cufflinks 0.385        
cufflinks 2.741       High
cufflinks 1.049        
cufflinks 0.367        
cufflinks 0.164       Low
cufflinks 0.416        
cufflinks 1.046        
cufflinks 0.088       Low
cufflinks 0.389        
cufflinks 0.191        

0 Strain