Gene : Glyma.19G178900 G. max Wm82.a2.v1
Genomic Order:  1789 Name:  ? Glyma.19G178900
Secondary Identifier:  ? PAC:30512355
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G178900 0.5kb upstream 0.5kb upstream 5393 true Chr19: 43801633-43807025 Glycine max
Glyma.19G178900 0.5kb upstream 0.5kb upstream 500 false Chr19: 43806526-43807025 Glycine max
Glyma.19G178900 0.5kb downstream 0.5kb downstream 5393 true Chr19: 43801133-43806525 Glycine max
Glyma.19G178900 0.5kb downstream 0.5kb downstream 500 false Chr19: 43801133-43801632 Glycine max
Glyma.19G178900 1.0kb upstream 1.0kb upstream 5893 true Chr19: 43801633-43807525 Glycine max
Glyma.19G178900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43806526-43807525 Glycine max
Glyma.19G178900 1.0kb downstream 1.0kb downstream 5893 true Chr19: 43800633-43806525 Glycine max
Glyma.19G178900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43800633-43801632 Glycine max
Glyma.19G178900 2.0kb upstream 2.0kb upstream 6893 true Chr19: 43801633-43808525 Glycine max
Glyma.19G178900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43806526-43808525 Glycine max
Glyma.19G178900 2.0kb downstream 2.0kb downstream 6893 true Chr19: 43799633-43806525 Glycine max
Glyma.19G178900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43799633-43801632 Glycine max
Glyma.19G178900 5.0kb upstream 5.0kb upstream 9893 true Chr19: 43801633-43811525 Glycine max
Glyma.19G178900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43806526-43811525 Glycine max
Glyma.19G178900 5.0kb downstream 5.0kb downstream 9893 true Chr19: 43796633-43806525 Glycine max
Glyma.19G178900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43796633-43801632 Glycine max
Glyma.19G178900 10.0kb upstream 10.0kb upstream 14893 true Chr19: 43801633-43816525 Glycine max
Glyma.19G178900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43806526-43816525 Glycine max
Glyma.19G178900 10.0kb downstream 10.0kb downstream 14893 true Chr19: 43791633-43806525 Glycine max
Glyma.19G178900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43791633-43801632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305697 5265 Fabidae View MSA
124067552 5270 Rosid View MSA
123746555 5271 Pentapetalae View MSA
122793282 5272 Eudicot View MSA
122043057 5273 Angiosperm View MSA
121310071 5274 Embryophyte View MSA
123347664 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.562074 0.0 3.75936   Low
cufflinks 14.8528 0.0 72.32   High
cufflinks 1.59708 0.0 9.41865    
cufflinks 5.2592 0.0 22.4064    
cufflinks 3.49259 0.0 17.643    
cufflinks 2.22503 0.0 11.8035    
cufflinks 7.0309 0.0 29.1462    
cufflinks 3.07195 0.0 16.5041    
cufflinks 4.12849 0.0 21.0727    
cufflinks 0.585        
cufflinks 0.027     Low Low
cufflinks 0.501        
cufflinks 0.625        
cufflinks 0.641        
cufflinks 0.029     Low Low
cufflinks 0.475        
cufflinks 0.193        
cufflinks 0.759        
cufflinks 1.807       High
cufflinks 0.252        
cufflinks 0.054     Low Low
cufflinks 0.372        
cufflinks 0.831        
cufflinks 0.019     Low Low
cufflinks 0.348        
cufflinks 0.114        

0 Strain