Gene : Glyma.19G179800 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1798
Name:  ? Glyma.19G179800 Secondary Identifier:  ? PAC:30512650
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G179800 0.5kb upstream 0.5kb upstream 2115 true Chr19: 43867049-43869163 Glycine max
Glyma.19G179800 0.5kb upstream 0.5kb upstream 500 false Chr19: 43868664-43869163 Glycine max
Glyma.19G179800 0.5kb downstream 0.5kb downstream 2115 true Chr19: 43866549-43868663 Glycine max
Glyma.19G179800 0.5kb downstream 0.5kb downstream 500 false Chr19: 43866549-43867048 Glycine max
Glyma.19G179800 1.0kb upstream 1.0kb upstream 2615 true Chr19: 43867049-43869663 Glycine max
Glyma.19G179800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43868664-43869663 Glycine max
Glyma.19G179800 1.0kb downstream 1.0kb downstream 2615 true Chr19: 43866049-43868663 Glycine max
Glyma.19G179800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43866049-43867048 Glycine max
Glyma.19G179800 2.0kb upstream 2.0kb upstream 3615 true Chr19: 43867049-43870663 Glycine max
Glyma.19G179800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43868664-43870663 Glycine max
Glyma.19G179800 2.0kb downstream 2.0kb downstream 3615 true Chr19: 43865049-43868663 Glycine max
Glyma.19G179800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43865049-43867048 Glycine max
Glyma.19G179800 5.0kb upstream 5.0kb upstream 6615 true Chr19: 43867049-43873663 Glycine max
Glyma.19G179800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43868664-43873663 Glycine max
Glyma.19G179800 5.0kb downstream 5.0kb downstream 6615 true Chr19: 43862049-43868663 Glycine max
Glyma.19G179800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43862049-43867048 Glycine max
Glyma.19G179800 10.0kb upstream 10.0kb upstream 11615 true Chr19: 43867049-43878663 Glycine max
Glyma.19G179800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43868664-43878663 Glycine max
Glyma.19G179800 10.0kb downstream 10.0kb downstream 11615 true Chr19: 43857049-43868663 Glycine max
Glyma.19G179800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43857049-43867048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307298 5265 Fabidae View MSA
124070867 5270 Rosid View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17129 0.0 10.1794   High
cufflinks 2.66168 0.0 8.73566   High
cufflinks 0.400846 0.0 1.51502    
cufflinks 1.1624 0.0 4.1447    
cufflinks 1.04139 0.0 3.74873    
cufflinks 1.18375 0.0 4.22204    
cufflinks 0.0719152 0.0 0.291718 Low Low
cufflinks 0.730997 0.0 2.68177    
cufflinks 0.751634 0.0 2.75639    
cufflinks 0.441        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.077        
cufflinks 1.686        
cufflinks 1.291        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.228        
cufflinks 0.106       Low
cufflinks 1.607        
cufflinks 1.217        
cufflinks 1.909        
cufflinks 0.026     Low Low
cufflinks 2.331        
cufflinks 1.739        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.635        
cufflinks 0.11       Low

0 Strain