Gene : Glyma.04G236900 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  2369
Name:  ? Glyma.04G236900 Secondary Identifier:  ? PAC:30487622
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUGLNSYN-PWY Glycine max pathologic  
Gmax PWY-3282 Glycine max pathologic  
Gmax PWY-6963 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G236900 0.5kb upstream 0.5kb upstream 13716 true Chr04: 50544950-50558665 Glycine max
Glyma.04G236900 0.5kb upstream 0.5kb upstream 500 false Chr04: 50544950-50545449 Glycine max
Glyma.04G236900 0.5kb downstream 0.5kb downstream 13716 true Chr04: 50545450-50559165 Glycine max
Glyma.04G236900 0.5kb downstream 0.5kb downstream 500 false Chr04: 50558666-50559165 Glycine max
Glyma.04G236900 1.0kb upstream 1.0kb upstream 14216 true Chr04: 50544450-50558665 Glycine max
Glyma.04G236900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50544450-50545449 Glycine max
Glyma.04G236900 1.0kb downstream 1.0kb downstream 14216 true Chr04: 50545450-50559665 Glycine max
Glyma.04G236900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50558666-50559665 Glycine max
Glyma.04G236900 2.0kb upstream 2.0kb upstream 15216 true Chr04: 50543450-50558665 Glycine max
Glyma.04G236900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50543450-50545449 Glycine max
Glyma.04G236900 2.0kb downstream 2.0kb downstream 15216 true Chr04: 50545450-50560665 Glycine max
Glyma.04G236900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50558666-50560665 Glycine max
Glyma.04G236900 5.0kb upstream 5.0kb upstream 18216 true Chr04: 50540450-50558665 Glycine max
Glyma.04G236900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50540450-50545449 Glycine max
Glyma.04G236900 5.0kb downstream 5.0kb downstream 18216 true Chr04: 50545450-50563665 Glycine max
Glyma.04G236900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50558666-50563665 Glycine max
Glyma.04G236900 10.0kb upstream 10.0kb upstream 23216 true Chr04: 50535450-50558665 Glycine max
Glyma.04G236900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50535450-50545449 Glycine max
Glyma.04G236900 10.0kb downstream 10.0kb downstream 23216 true Chr04: 50545450-50568665 Glycine max
Glyma.04G236900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50558666-50568665 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308491 5265 Fabidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.442 0.0 110.891 High High
cufflinks 3.85212 0.0 10.277   Low
cufflinks 8.21966 0.0 22.6743    
cufflinks 12.6926 0.0 36.6973    
cufflinks 22.1027 0.0 69.7692 High  
cufflinks 7.73043 0.0 21.2035    
cufflinks 23.4889 0.0 74.8976 High  
cufflinks 8.57288 0.0 23.7029    
cufflinks 15.3627 0.0 45.61    
cufflinks 8.044     High  
cufflinks 34.585     High  
cufflinks 14.038     High  
cufflinks 20.315     High  
cufflinks 23.578     High  
cufflinks 198.285     High High
cufflinks 6.998        
cufflinks 13.315     High  
cufflinks 26.159     High  
cufflinks 9.61     High  
cufflinks 3.464       Low
cufflinks 37.125     High  
cufflinks 4.445       Low
cufflinks 4.766       Low
cufflinks 29.965     High  
cufflinks 5.382        
cufflinks 18.454     High  

0 Strain