Gene : Glyma.04G235600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11262:SF11 - ATP-DEPENDENT CLP PROTEASE REGULATORY SUBUNIT CLPX Genomic Order:  2356
Name:  ? Glyma.04G235600 Secondary Identifier:  ? PAC:30490681
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G235600 0.5kb upstream 0.5kb upstream 5998 true Chr04: 50367675-50373672 Glycine max
Glyma.04G235600 0.5kb upstream 0.5kb upstream 500 false Chr04: 50367675-50368174 Glycine max
Glyma.04G235600 0.5kb downstream 0.5kb downstream 5998 true Chr04: 50368175-50374172 Glycine max
Glyma.04G235600 0.5kb downstream 0.5kb downstream 500 false Chr04: 50373673-50374172 Glycine max
Glyma.04G235600 1.0kb upstream 1.0kb upstream 6498 true Chr04: 50367175-50373672 Glycine max
Glyma.04G235600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50367175-50368174 Glycine max
Glyma.04G235600 1.0kb downstream 1.0kb downstream 6498 true Chr04: 50368175-50374672 Glycine max
Glyma.04G235600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50373673-50374672 Glycine max
Glyma.04G235600 2.0kb upstream 2.0kb upstream 7498 true Chr04: 50366175-50373672 Glycine max
Glyma.04G235600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50366175-50368174 Glycine max
Glyma.04G235600 2.0kb downstream 2.0kb downstream 7498 true Chr04: 50368175-50375672 Glycine max
Glyma.04G235600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50373673-50375672 Glycine max
Glyma.04G235600 5.0kb upstream 5.0kb upstream 10498 true Chr04: 50363175-50373672 Glycine max
Glyma.04G235600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50363175-50368174 Glycine max
Glyma.04G235600 5.0kb downstream 5.0kb downstream 10498 true Chr04: 50368175-50378672 Glycine max
Glyma.04G235600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50373673-50378672 Glycine max
Glyma.04G235600 10.0kb upstream 10.0kb upstream 15498 true Chr04: 50358175-50373672 Glycine max
Glyma.04G235600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50358175-50368174 Glycine max
Glyma.04G235600 10.0kb downstream 10.0kb downstream 15498 true Chr04: 50368175-50383672 Glycine max
Glyma.04G235600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50373673-50383672 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308819 5265 Fabidae View MSA
124065243 5270 Rosid View MSA
123749769 5271 Pentapetalae View MSA
122790976 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.5641 0.0 63.7155 High  
cufflinks 12.9419 0.0 34.546    
cufflinks 32.0027 0.0 88.5684 High High
cufflinks 15.305 0.0 40.8425    
cufflinks 9.53513 0.0 25.6495   Low
cufflinks 22.2716 0.0 60.0667    
cufflinks 10.3041 0.0 27.6366   Low
cufflinks 21.0004 0.0 56.4582    
cufflinks 16.0422 0.0 42.8313    
cufflinks 4.232        
cufflinks 5.303        
cufflinks 8.635     High High
cufflinks 4.348        
cufflinks 2.699       Low
cufflinks 5.902     High  
cufflinks 5.13        
cufflinks 5.344        
cufflinks 4.945        
cufflinks 5.416        
cufflinks 7.22     High High
cufflinks 5.577        
cufflinks 6.998       High
cufflinks 4.208        
cufflinks 6.905     High  
cufflinks 5.906        
cufflinks 5.029        

0 Strain