Gene : Glyma.04G235400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Genomic Order:  2354
Name:  ? Glyma.04G235400 Secondary Identifier:  ? PAC:30487737
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G235400 0.5kb upstream 0.5kb upstream 5224 true Chr04: 50351726-50356949 Glycine max
Glyma.04G235400 0.5kb upstream 0.5kb upstream 500 false Chr04: 50356450-50356949 Glycine max
Glyma.04G235400 0.5kb downstream 0.5kb downstream 5224 true Chr04: 50351226-50356449 Glycine max
Glyma.04G235400 0.5kb downstream 0.5kb downstream 500 false Chr04: 50351226-50351725 Glycine max
Glyma.04G235400 1.0kb upstream 1.0kb upstream 5724 true Chr04: 50351726-50357449 Glycine max
Glyma.04G235400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50356450-50357449 Glycine max
Glyma.04G235400 1.0kb downstream 1.0kb downstream 5724 true Chr04: 50350726-50356449 Glycine max
Glyma.04G235400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50350726-50351725 Glycine max
Glyma.04G235400 2.0kb upstream 2.0kb upstream 6724 true Chr04: 50351726-50358449 Glycine max
Glyma.04G235400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50356450-50358449 Glycine max
Glyma.04G235400 2.0kb downstream 2.0kb downstream 6724 true Chr04: 50349726-50356449 Glycine max
Glyma.04G235400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50349726-50351725 Glycine max
Glyma.04G235400 5.0kb upstream 5.0kb upstream 9724 true Chr04: 50351726-50361449 Glycine max
Glyma.04G235400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50356450-50361449 Glycine max
Glyma.04G235400 5.0kb downstream 5.0kb downstream 9724 true Chr04: 50346726-50356449 Glycine max
Glyma.04G235400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50346726-50351725 Glycine max
Glyma.04G235400 10.0kb upstream 10.0kb upstream 14724 true Chr04: 50351726-50366449 Glycine max
Glyma.04G235400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50356450-50366449 Glycine max
Glyma.04G235400 10.0kb downstream 10.0kb downstream 14724 true Chr04: 50341726-50356449 Glycine max
Glyma.04G235400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50341726-50351725 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311115 5265 Fabidae View MSA
124061154 5270 Rosid View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55941 0.0 13.7076    
cufflinks 27.2271 0.0 107.837 High High
cufflinks 3.66781 0.0 20.1051    
cufflinks 24.2823 0.0 94.9972 High High
cufflinks 0.999063 0.0 8.17669   Low
cufflinks 2.40143 0.0 13.6111    
cufflinks 10.8136 0.0 37.8385    
cufflinks 3.12116 0.0 15.5158    
cufflinks 2.14874 0.0 12.3993    
cufflinks 0.38        
cufflinks 0.008     Low Low
cufflinks 0.717        
cufflinks 0.024     Low  
cufflinks 0.006     Low Low
cufflinks 0.057        
cufflinks 4.399       High
cufflinks 0.134        
cufflinks 2.404        
cufflinks 3.471        
cufflinks 4.992       High
cufflinks 0.026     Low  
cufflinks 4.687       High
cufflinks 5.161       High
cufflinks 0.021     Low  
cufflinks 4.978       High
cufflinks 0.011     Low Low

0 Strain