Gene : Glyma.04G237300 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.22 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  2373
Name:  ? Glyma.04G237300 Secondary Identifier:  ? PAC:30488330
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSPECAT-PWY Glycine max pathologic  
Gmax BSUBPOLYAMSYN-PWY Glycine max pathologic  
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G237300 0.5kb upstream 0.5kb upstream 5761 true Chr04: 50585302-50591062 Glycine max
Glyma.04G237300 0.5kb upstream 0.5kb upstream 500 false Chr04: 50585302-50585801 Glycine max
Glyma.04G237300 0.5kb downstream 0.5kb downstream 5761 true Chr04: 50585802-50591562 Glycine max
Glyma.04G237300 0.5kb downstream 0.5kb downstream 500 false Chr04: 50591063-50591562 Glycine max
Glyma.04G237300 1.0kb upstream 1.0kb upstream 6261 true Chr04: 50584802-50591062 Glycine max
Glyma.04G237300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50584802-50585801 Glycine max
Glyma.04G237300 1.0kb downstream 1.0kb downstream 6261 true Chr04: 50585802-50592062 Glycine max
Glyma.04G237300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50591063-50592062 Glycine max
Glyma.04G237300 2.0kb upstream 2.0kb upstream 7261 true Chr04: 50583802-50591062 Glycine max
Glyma.04G237300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50583802-50585801 Glycine max
Glyma.04G237300 2.0kb downstream 2.0kb downstream 7261 true Chr04: 50585802-50593062 Glycine max
Glyma.04G237300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50591063-50593062 Glycine max
Glyma.04G237300 5.0kb upstream 5.0kb upstream 10261 true Chr04: 50580802-50591062 Glycine max
Glyma.04G237300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50580802-50585801 Glycine max
Glyma.04G237300 5.0kb downstream 5.0kb downstream 10261 true Chr04: 50585802-50596062 Glycine max
Glyma.04G237300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50591063-50596062 Glycine max
Glyma.04G237300 10.0kb upstream 10.0kb upstream 15261 true Chr04: 50575802-50591062 Glycine max
Glyma.04G237300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50575802-50585801 Glycine max
Glyma.04G237300 10.0kb downstream 10.0kb downstream 15261 true Chr04: 50585802-50601062 Glycine max
Glyma.04G237300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50591063-50601062 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304285 5265 Fabidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5533 0.0 58.3087    
cufflinks 14.188 0.0 50.0564    
cufflinks 30.1158 0.0 107.117 High High
cufflinks 11.2286 0.0 40.5253    
cufflinks 8.74426 0.0 28.4503   Low
cufflinks 22.9205 0.0 80.4812 High  
cufflinks 25.7051 0.0 77.2476 High High
cufflinks 10.1359 0.0 36.9291    
cufflinks 13.088 0.0 41.8839    
cufflinks 1.659        
cufflinks 6.647     High High
cufflinks 5.685       High
cufflinks 1.244       Low
cufflinks 1.472       Low
cufflinks 4.34        
cufflinks 2.074        
cufflinks 1.227       Low
cufflinks 4.151        
cufflinks 3.325        
cufflinks 2.185        
cufflinks 2.458        
cufflinks 2.278        
cufflinks 2.09        
cufflinks 5.279       High
cufflinks 2.365        
cufflinks 2.23        

0 Strain