Gene : Glyma.19G182000 G. max Wm82.a2.v1
Defline:  (1 of 4) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  1820
Name:  ? Glyma.19G182000 Secondary Identifier:  ? PAC:30513040
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G182000 0.5kb upstream 0.5kb upstream 5903 true Chr19: 44062237-44068139 Glycine max
Glyma.19G182000 0.5kb upstream 0.5kb upstream 500 false Chr19: 44067640-44068139 Glycine max
Glyma.19G182000 0.5kb downstream 0.5kb downstream 5903 true Chr19: 44061737-44067639 Glycine max
Glyma.19G182000 0.5kb downstream 0.5kb downstream 500 false Chr19: 44061737-44062236 Glycine max
Glyma.19G182000 1.0kb upstream 1.0kb upstream 6403 true Chr19: 44062237-44068639 Glycine max
Glyma.19G182000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44067640-44068639 Glycine max
Glyma.19G182000 1.0kb downstream 1.0kb downstream 6403 true Chr19: 44061237-44067639 Glycine max
Glyma.19G182000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44061237-44062236 Glycine max
Glyma.19G182000 2.0kb upstream 2.0kb upstream 7403 true Chr19: 44062237-44069639 Glycine max
Glyma.19G182000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44067640-44069639 Glycine max
Glyma.19G182000 2.0kb downstream 2.0kb downstream 7403 true Chr19: 44060237-44067639 Glycine max
Glyma.19G182000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44060237-44062236 Glycine max
Glyma.19G182000 5.0kb upstream 5.0kb upstream 10403 true Chr19: 44062237-44072639 Glycine max
Glyma.19G182000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44067640-44072639 Glycine max
Glyma.19G182000 5.0kb downstream 5.0kb downstream 10403 true Chr19: 44057237-44067639 Glycine max
Glyma.19G182000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44057237-44062236 Glycine max
Glyma.19G182000 10.0kb upstream 10.0kb upstream 15403 true Chr19: 44062237-44077639 Glycine max
Glyma.19G182000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44067640-44077639 Glycine max
Glyma.19G182000 10.0kb downstream 10.0kb downstream 15403 true Chr19: 44052237-44067639 Glycine max
Glyma.19G182000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44052237-44062236 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309738 5265 Fabidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.7771 0.0 182.124 High  
cufflinks 48.6488 0.0 245.445 High  
cufflinks 27.3583 0.0 120.195 High Low
cufflinks 63.4165 0.0 322.191 High  
cufflinks 60.2951 0.0 323.825 High  
cufflinks 31.7579 0.0 143.973 High  
cufflinks 185.585 0.0 1610.94 High High
cufflinks 37.6231 0.0 175.978 High  
cufflinks 52.8825 0.0 222.749 High  
cufflinks 6.248        
cufflinks 2.553       Low
cufflinks 6.481        
cufflinks 10.11     High High
cufflinks 10.469     High High
cufflinks 5.157        
cufflinks 8.322     High  
cufflinks 3.938        
cufflinks 6.708        
cufflinks 7.962     High  
cufflinks 8.637     High  
cufflinks 3.541       Low
cufflinks 8.473     High  
cufflinks 8.763     High  
cufflinks 3.099       Low
cufflinks 7.959     High  
cufflinks 3.59       Low

0 Strain