Gene : Glyma.19G182800 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3067 - Translin family protein Genomic Order:  1828
Name:  ? Glyma.19G182800 Secondary Identifier:  ? PAC:30512607
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G182800 0.5kb upstream 0.5kb upstream 4308 true Chr19: 44156119-44160426 Glycine max
Glyma.19G182800 0.5kb upstream 0.5kb upstream 500 false Chr19: 44159927-44160426 Glycine max
Glyma.19G182800 0.5kb downstream 0.5kb downstream 4308 true Chr19: 44155619-44159926 Glycine max
Glyma.19G182800 0.5kb downstream 0.5kb downstream 500 false Chr19: 44155619-44156118 Glycine max
Glyma.19G182800 1.0kb upstream 1.0kb upstream 4808 true Chr19: 44156119-44160926 Glycine max
Glyma.19G182800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44159927-44160926 Glycine max
Glyma.19G182800 1.0kb downstream 1.0kb downstream 4808 true Chr19: 44155119-44159926 Glycine max
Glyma.19G182800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44155119-44156118 Glycine max
Glyma.19G182800 2.0kb upstream 2.0kb upstream 5808 true Chr19: 44156119-44161926 Glycine max
Glyma.19G182800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44159927-44161926 Glycine max
Glyma.19G182800 2.0kb downstream 2.0kb downstream 5808 true Chr19: 44154119-44159926 Glycine max
Glyma.19G182800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44154119-44156118 Glycine max
Glyma.19G182800 5.0kb upstream 5.0kb upstream 8808 true Chr19: 44156119-44164926 Glycine max
Glyma.19G182800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44159927-44164926 Glycine max
Glyma.19G182800 5.0kb downstream 5.0kb downstream 8808 true Chr19: 44151119-44159926 Glycine max
Glyma.19G182800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44151119-44156118 Glycine max
Glyma.19G182800 10.0kb upstream 10.0kb upstream 13808 true Chr19: 44156119-44169926 Glycine max
Glyma.19G182800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44159927-44169926 Glycine max
Glyma.19G182800 10.0kb downstream 10.0kb downstream 13808 true Chr19: 44146119-44159926 Glycine max
Glyma.19G182800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44146119-44156118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299168 5265 Fabidae View MSA
124066940 5270 Rosid View MSA
123747693 5271 Pentapetalae View MSA
122792898 5272 Eudicot View MSA
122045225 5273 Angiosperm View MSA
121345043 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.829 0.0 35.1062    
cufflinks 23.507 0.0 62.7379 High  
cufflinks 6.96741 0.0 20.2056   Low
cufflinks 19.8186 0.0 53.0632    
cufflinks 18.4752 0.0 49.57    
cufflinks 10.6381 0.0 29.4994    
cufflinks 40.1242 0.0 108.052 High High
cufflinks 11.8729 0.0 32.593    
cufflinks 17.0588 0.0 45.8804    
cufflinks 3.651        
cufflinks 2.991       Low
cufflinks 4.991        
cufflinks 6.292       High
cufflinks 8.677     High High
cufflinks 2.977       Low
cufflinks 4.991        
cufflinks 3.554        
cufflinks 5.424        
cufflinks 7.42       High
cufflinks 3.57        
cufflinks 2.794       Low
cufflinks 4.09        
cufflinks 6.346       High
cufflinks 2.648       Low
cufflinks 4.255        
cufflinks 4.118        

0 Strain